Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00083 ATGTTTTCGTGGCTGGCAAGGATGGCGTCGGCTTGTTGGAAACCAGTGAGGCGGTATGCCCGTATGAACAAGGATGATGATGAAGATTGTTCGTTAGAGGACTCTTTGTTGTGGAGCAGAGAGCTTGAAAAGCATTCTTATGGGGAATTTTCTTTTGCTGTGGTTCAAGCGAATGAGGTAATTGAGGATAATAGTCAGGTTGAGGCTGGCCGTGATGCCACTTTTGTCGGCGTTTATGATGGCCATGGTGGCGCTGATGCTTCTCGCTTTATCTGTGATCATCTTTTCAGGAATTTAATGAGTGAGTGTTCAAGGGTTGATCCTCTTCTTGTTCTTCTTCTTCCTTTTGATCTTCTTGAACTTTATTTCATGCTTTGGACCATAGGGCTTGCTCAAGAACATGGAACCATAACCGAAGACACCGTCCGGAATGCATTTTCTGCTACGGAGGAAGGGTTTCTTACCCTTGTTCGTCGGTCTTGGGGTATCAAACCGACAATTGCAGCAATGGGATCTTGTTGCCTGGTCGGAGTTATCTGGAGAGGTACATTGTTCATCGGTAACGTTGGCGATTCCCGGGCTGTCATCGGTTCTTTAGGTAAAGCTAATAAGATAGTTGCAGAACAGTTGACAAAGGATCACAATGCAAGTATTGAGGAGGTTCGACAAGAACTCCGGTCCTTGCATCCCGATGACTCACATATCGTCGTTATGAAGCACGGAGTCTGGCGTATAAAAGGCATAATTCAGGTTTCCAGATCGATAGGTGATGCGTATTTGAAAAGGTCGGAATTCTCTCTCGATCCATCCTTTCCACGGTTCCACCTTGCCGAGCCTCTTCGACGACCTGTTCTTACTGCCGAACCATCGTTGAGCACAAGAGTTCTACAACCTCATGACAAGTTTCTCATATTTGCATCTGATGGTCTTTGGGAGCAATTATCGAATCAACAAGCTGTCGAGATTGTGTATAAAAACCCACGAGCGGGAATCGCAAAAAGACTTGTCAAAACAGCATTAACCGAGGCTGCAAGGAAGAGGGAGATGAGATATGATGATCTGAAGAAGCTCGAAAAAGGGATACGACGATTCTTTCACGACGATATCACAGTTGTTGTCATATTTCTGGACAACGAATTGCAAGGGAAGAAGGCACATGTACCAGAATTATCCATTCGTGGGTTCACCGACACGGTTGGACCATCGAATTTCAACGTTCTTCAAGGCATCGATGAGAATGGAAGATCTGTTGGGTGA 1257 45.43 MFSWLARMASACWKPVRRYARMNKDDDEDCSLEDSLLWSRELEKHSYGEFSFAVVQANEVIEDNSQVEAGRDATFVGVYDGHGGADASRFICDHLFRNLMSECSRVDPLLVLLLPFDLLELYFMLWTIGLAQEHGTITEDTVRNAFSATEEGFLTLVRRSWGIKPTIAAMGSCCLVGVIWRGTLFIGNVGDSRAVIGSLGKANKIVAEQLTKDHNASIEEVRQELRSLHPDDSHIVVMKHGVWRIKGIIQVSRSIGDAYLKRSEFSLDPSFPRFHLAEPLRRPVLTAEPSLSTRVLQPHDKFLIFASDGLWEQLSNQQAVEIVYKNPRAGIAKRLVKTALTEAARKREMRYDDLKKLEKGIRRFFHDDITVVVIFLDNELQGKKAHVPELSIRGFTDTVGPSNFNVLQGIDENGRSVG 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 580846 583800 + Carg01226-RA Car06g00083 149819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00083 418 ProSitePatterns PPM-type phosphatase domain signature. 75 83 IPR000222 GO:0043169
Car06g00083 418 ProSiteProfiles PPM-type phosphatase domain profile. 49 376 IPR001932 -
Car06g00083 418 Pfam Protein phosphatase 2C 68 344 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00083 Car14g00383 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00083 Car-Chr6:580846 Car20g00642 Car-Chr20:3616045 4.80E-145 dispersed
Car14g00383 Car-Chr14:1921536 Car06g00083 Car-Chr6:580846 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00083 K01102 - csv:101222146 711.835