Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00111 ATGGGTCTAAAATTTGAGAGCTCTTCTCAGCCATGTGCTGATCGGCAGGCACGTCGGGGCTGTGGTTCCGATTCAGCTGGCTGCCAAGATGGGCTACTTTGGTACAAGGACCATGGCCACCATGTCAATGGAGAGTTTTCAATGGCTGTTGTTCAGGCCAACAATTTACTTGAGGATCAGAGCCAGCTTGAGTCTGGCCCCTTGAGCTTGCTCGAGTCGGGACCCTATGGAACCTTTGTTGGCATATACGATGGCCATGAAGAGGGGTTTCTCTCTATTGTCACCAAGCAATGGCCTATGAACCCCCAGATTGCGGCTGTTGGTTCTTGCTGTCTGGTTGGAGTGATTTGTGACGGGAAACTCTACATTGCGAACCTAGGTGATTCCCGTGCCGTGTTGGGAAGGCTTGTTCGGTCCACTGGAGAAGTTCTTCCGATTCAGCTATCATCAGAGCACAATGCAAGTATACCGTCAGTCCGCCAGGAGATGCAGTCTTTGCACCCCGATGACCCCCGTATAGTGGTGTTGAAGCATAATGTATGGCGCGTAAAGGGCTTGATTCAGATTTCTCGGTCAATTGGAGACGTATATCTCAAGAAGCCAGAATTCAACCGGGAGCCATTGTATGCTAAGTTTCGCCTCCAAGAACCGTTCAGTAGGCCTATTCTGAGCTCAGAACCAGCAATCTCTGTGCACGAACTCGATCCGAACGATCAATTCCTCATATTTGCTTCTGATGGGCTATGGGAGCACCTTAGCAACCAGGAAGCAGTTGATATTGTTCACAAGAATCCTCACAGTGGAAGTGCAAGGAGGTTGGTGAAAGCAGCAATGCAGGAAGCAGCTAAGAAACGAGAAATGCGGTACTCGGACTTGAAGAAGATCGACCGTGGGGTTCGGCGTCATTTTCACGACGACACAACGGTGATAGTTGTGTTTCTGGGTTCGAGTGGTTCAGGAGGAAGGAGCCCTGTTTTGTCAGTGAGAGGGGGAGGGGTGAACCTATCTGCAAAGGCTGTAGCAGCTTCTAAGCTCAACACTACTCCCCAATGA 1053 50.24 MGLKFESSSQPCADRQARRGCGSDSAGCQDGLLWYKDHGHHVNGEFSMAVVQANNLLEDQSQLESGPLSLLESGPYGTFVGIYDGHEEGFLSIVTKQWPMNPQIAAVGSCCLVGVICDGKLYIANLGDSRAVLGRLVRSTGEVLPIQLSSEHNASIPSVRQEMQSLHPDDPRIVVLKHNVWRVKGLIQISRSIGDVYLKKPEFNREPLYAKFRLQEPFSRPILSSEPAISVHELDPNDQFLIFASDGLWEHLSNQEAVDIVHKNPHSGSARRLVKAAMQEAAKKREMRYSDLKKIDRGVRRHFHDDTTVIVVFLGSSGSGGRSPVLSVRGGGVNLSAKAVAASKLNTTPQ 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 720813 723850 + Carg01198-RA Car06g00111 149847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00111 350 ProSiteProfiles PPM-type phosphatase domain profile. 8 314 IPR001932 -
Car06g00111 350 MobiDBLite consensus disorder prediction 1 23 - -
Car06g00111 350 Pfam Protein phosphatase 2C 82 283 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00111 Car-Chr6:720813 Car07g00353 Car-Chr7:1775218 0 dispersed
Car16g01184 Car-Chr16:10034965 Car06g00111 Car-Chr6:720813 1.20E-137 wgd
Car03g00605 Car-Chr3:5617688 Car06g00111 Car-Chr6:720813 7.46E-180 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00111 K01102 - csv:101220137 584.334