Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00116 ATGCCGATCGAAGAAGATGTTGAGAGTTGCGGTAGCAGAGCTACGAACTCCTCTTCTCCCCATGCGACCTCCAGGCATCATCGCCAGAAGCTCGAGGTTTATACCGAAGTGCTCCGACGGATTCAGGAATCCAATTTTCATGAGGCGAATCTACCTGGGTTTGATGATGAGCTCTGGCTCCACTTCAATCGCCTTCCTGCTCGATACGCATTGGATGTGAATGTCGACAGGGCGGAAGATGTACTCACGCATAAGAGATTACTTCAATTGGCTGTAGACCCTGCTAAACGGCCTGTATTTGAAGTTCGTCCTGTGCAGGTTTATCCTTCTGCAAATGAAAACCTTTTCAATTCTTCTTGTTTGGATCCTTCAATGATGGAAGATGCTCAGAGCTCTTTTAATTGTTCTATCAAACATGGGAACCATCCACCTCCAACCTTTGGTTCTTCACCTAGTCTTGAAGCACGTGCACTTCAGGCCATTAAGTATGGGGTTGAAGATAGGGACAGTGCCCTAAACGCAACGCCTTGCTTTTCTCGGCCAATGCATGAGATCACGTTTGCAACAACTGACAAGCCTAAACTCCTTAGTCAGTTAACTTCCCTACTGGCTGATGTTGGACTTAACATACAAGAAGCTCATGCTTTCTCCTCTGTTGATGGTTTCTCTCTGGATGTTTTTGTCATTGATGGTTGGCCTTTTGAGGAAACTGAGGAGCTTAAAAGGGCATTAGAAAAAGAAGTTTCAAATTTCAAGGAGCAGTGTTGGTCAGAAAAGCAGTCCAGTCCTGCTTTGGGTAAGCATGACCAGAATAGAGTTGAATCTTTTCCTAGTTGTGTTGAAATACCTACTGATGGTACTGATGTCTGGGAAATTGACGCCAGACAACTAAAATTTGAGAATAAAGTTGGATCCGGGTCATATGGGGACCTGTATCGAGGCACGTATTGTAGTCAAGAAGTAGCTATTAAAGTACTGAAGCCTGAGCGTATTAATGAAGAGATGCTCAAAGAATTCTCTCAAGAAGTTTATATAATGAGGAAAGTTCGGCACAAAAATGTTGTTCAATTAATTGGTGCTTGTACTAAACCTCCAAAACTTTGCATCGTGACCGAGTTTATGTCGAGAGGAAGTATATATGACTTCCTTCATAAGCAAAGAGGAGCATTTAACCTTATATCTCTACTTAAAGTAGCCATTGATATTTCAAGAGGGATGAATTATTTGCACCAAAATAATATAATCCACCGAGACCTCAAGACTGCCAATCTTCTGATGGATGAAAACATGGTCGTTAAGGTTGCTGATTTTGGAGTCGCCAGAGTTCAAGCTCAATCTGGAGTGATGACAGCTGAAACTGGAACATACCGGTGGATGGCTCCTGAAGTTATTGAGCATAAACCATACGACCAGAAGGCAGATGTTTTCAGTTTTGGAATAGCCTTGTGGGAGCTTTTAACTGGAGAAATTCCTTACTCATCTATGACCCCATTACAAGCAGCTGTTGGTGTGGTCCAGAAGAGACTGCGCCCAGTAATACCCAAGAACACCCATCCCGTTCTTGCCGAACTTCTTGAGAGATGCTGGCGACAGGATCCAACCGAACGTCCAAACTTCACTGAAATTTTAGAGATCCTCAAGCAGATTGCTGACCAGGTCGAAAACAACGGGGAACATCGACGCAAGAAAGATAAGTTATCTGGCGCGTTTTTCTCAGCCTTCAAAAAGGGGTACCACTGA 1740 43.68 MPIEEDVESCGSRATNSSSPHATSRHHRQKLEVYTEVLRRIQESNFHEANLPGFDDELWLHFNRLPARYALDVNVDRAEDVLTHKRLLQLAVDPAKRPVFEVRPVQVYPSANENLFNSSCLDPSMMEDAQSSFNCSIKHGNHPPPTFGSSPSLEARALQAIKYGVEDRDSALNATPCFSRPMHEITFATTDKPKLLSQLTSLLADVGLNIQEAHAFSSVDGFSLDVFVIDGWPFEETEELKRALEKEVSNFKEQCWSEKQSSPALGKHDQNRVESFPSCVEIPTDGTDVWEIDARQLKFENKVGSGSYGDLYRGTYCSQEVAIKVLKPERINEEMLKEFSQEVYIMRKVRHKNVVQLIGACTKPPKLCIVTEFMSRGSIYDFLHKQRGAFNLISLLKVAIDISRGMNYLHQNNIIHRDLKTANLLMDENMVVKVADFGVARVQAQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGEIPYSSMTPLQAAVGVVQKRLRPVIPKNTHPVLAELLERCWRQDPTERPNFTEILEILKQIADQVENNGEHRRKKDKLSGAFFSAFKKGYH 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 746325 752661 + Carg01193-RA Car06g00116 149852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00116 579 ProSitePatterns Protein kinases ATP-binding region signature. 303 324 IPR017441 GO:0005524
Car06g00116 579 Pfam Protein tyrosine and serine/threonine kinase 297 546 IPR001245 GO:0004672|GO:0006468
Car06g00116 579 ProSiteProfiles ACT domain profile. 184 259 IPR002912 -
Car06g00116 579 Coils Coil 234 254 - -
Car06g00116 579 ProSiteProfiles Protein kinase domain profile. 297 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00116 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Car06g00116 579 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01564 Car-Chr1:13026120 Car06g00116 Car-Chr6:746325 3.38E-79 dispersed
Car04g02350 Car-Chr4:18906157 Car06g00116 Car-Chr6:746325 3.74E-118 dispersed
Car06g00116 Car-Chr6:746325 Car19g00592 Car-Chr19:7307944 0 dispersed
Car09g00308 Car-Chr9:1709692 Car06g00116 Car-Chr6:746325 2.88E-25 dispersed
Car16g01190 Car-Chr16:10064463 Car06g00116 Car-Chr6:746325 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88913 PF07714 PK_Tyr_Ser-Thr 1.90E-74 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00116 - - csv:101220844 1043.49