Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00141 ATGGAGTCGGACTTCGTGGTGATTCTGGCGGCGCTACTGTGTGCTCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCGTGGCTCCGGCGTGGCAATAACGGTGGCGGTGCAGGAAATCAGGCGTCAGCGAACAGGGGATTGAAGAAGAAAATCCTGCAATCCCTCCCGAAATTCGCGTACAGAGCATCGGGGTCGGGCGGAGAAGAGAAATTCGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCCTAGACGGGGAGGAGATCCGACAACTGCCGCAGTGTGGCCATTGCTTCCACGTCAGCTGCGTAGACACGTGGCTGAGCTCCCACTCGTCCTGCCCCTCTTGCCGCCAGATTCTGGTAGTCGCCAGATGCCAGAAGTGCGGCGAGTTCCCGGCCGTCGTCCACGGCGGCGATCACAACACCGAGGAGGAGCAAAAGAGGAGGGAAGATAACAACGGTAACAACAGAGGTTTGGGATTTTTGCCTTGA 501 58.48 MESDFVVILAALLCALICMVGLIAVARCAWLRRGNNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNTEEEQKRREDNNGNNRGLGFLP 166
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 871727 872227 + Carg01168-RA Car06g00141 149877
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car06g00141 166 ProSiteProfiles Zinc finger RING-type profile. 78 120 IPR001841 -
Car06g00141 166 MobiDBLite consensus disorder prediction 142 166 - -
Car06g00141 166 Pfam Ring finger domain 77 120 IPR001841 -
Car06g00141 166 MobiDBLite consensus disorder prediction 142 157 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01599 Car-Chr1:13188869 Car06g00141 Car-Chr6:871727 3.95E-57 dispersed
Car06g00141 Car-Chr6:871727 Car15g00176 Car-Chr15:941800 2.29E-33 dispersed
Car17g00656 Car-Chr17:6089343 Car06g00141 Car-Chr6:871727 8.08E-21 dispersed
Car06g00141 Car-Chr6:871727 Car09g00029 Car-Chr9:146924 1.65E-61 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00141 - - cmos:111440980 321.627