Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car06g00141 | ATGGAGTCGGACTTCGTGGTGATTCTGGCGGCGCTACTGTGTGCTCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCGTGGCTCCGGCGTGGCAATAACGGTGGCGGTGCAGGAAATCAGGCGTCAGCGAACAGGGGATTGAAGAAGAAAATCCTGCAATCCCTCCCGAAATTCGCGTACAGAGCATCGGGGTCGGGCGGAGAAGAGAAATTCGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCCTAGACGGGGAGGAGATCCGACAACTGCCGCAGTGTGGCCATTGCTTCCACGTCAGCTGCGTAGACACGTGGCTGAGCTCCCACTCGTCCTGCCCCTCTTGCCGCCAGATTCTGGTAGTCGCCAGATGCCAGAAGTGCGGCGAGTTCCCGGCCGTCGTCCACGGCGGCGATCACAACACCGAGGAGGAGCAAAAGAGGAGGGAAGATAACAACGGTAACAACAGAGGTTTGGGATTTTTGCCTTGA | 501 | 58.48 | MESDFVVILAALLCALICMVGLIAVARCAWLRRGNNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLAEFLDGEEIRQLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGGDHNTEEEQKRREDNNGNNRGLGFLP | 166 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 871727 | 872227 | + | Carg01168-RA | Car06g00141 | 149877 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car06g00141 | 166 | ProSiteProfiles | Zinc finger RING-type profile. | 78 | 120 | IPR001841 | - | |
Car06g00141 | 166 | MobiDBLite | consensus disorder prediction | 142 | 166 | - | - | |
Car06g00141 | 166 | Pfam | Ring finger domain | 77 | 120 | IPR001841 | - | |
Car06g00141 | 166 | MobiDBLite | consensus disorder prediction | 142 | 157 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car01g01599 | Car-Chr1:13188869 | Car06g00141 | Car-Chr6:871727 | 3.95E-57 | dispersed | |
Car06g00141 | Car-Chr6:871727 | Car15g00176 | Car-Chr15:941800 | 2.29E-33 | dispersed | |
Car17g00656 | Car-Chr17:6089343 | Car06g00141 | Car-Chr6:871727 | 8.08E-21 | dispersed | |
Car06g00141 | Car-Chr6:871727 | Car09g00029 | Car-Chr9:146924 | 1.65E-61 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car06g00141 | - | - | cmos:111440980 | 321.627 |