Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car06g00146 | ATGTGTGATGCGATGGAGGAACAGGAATCTGCACAAGATATTCCAGTTGCTTTAGGTGAAGGCAACCAAGTTATTTCTAAAGATGAGCTCCATGATTCTCTCCCTTTGCCAGCTGAGGCAACTCCGAACTCTTGTGAAAATAAGATCAATTCACCTGAAACTCATGTACAGGAAGTCGTACCTCCGGAGGATAATTTAGATAAATCTACGATTCCTCAGCAATCAAATCAAGATTCTGCGAATTCACTTCCCAATCACGACCAAGACTTGGATAAGCCTGATGCAGAACCTGCTTCTGATGTCAAGACTGGGCCTGATGAGTTGCCTCCAAGGGAGTTGGGTCTAGATGCTGCTACTTCCAACACTCACCTGGAAACCGTGCATCCCTCCTTGGATGCTGAGGCCTTTGGGATGCCTGAAACTAAAACGGGTTCTCTTGATGATGCTTCAACAGCCAGTCATGATGAACCTGTAACTCCCCATCCCGTCTCATCATGTATTAAAGCTGAAACAGAGAATGCCATAGAATTGAAGGTCAATGAAGACAATGTTGCTACACCTCACAATGGGCATTCAAATATGAATCACTCGTTTATTTTGGATGAAAATCAAATTGCTGAAGGTAGTGAATCAGGAACAGAAGAAGAGCAATCTGCTTTCATGAAGGAGCTTGAGAATTTCTTCAGAGAAAGAGGCATGGAATTCAAGCCTCCCAAGTTTTATGGAGAAGGACTGAATTGCCTCAAGTTATGGAGGGCTGTGACTAGATTGGGAGGCTATGACAAGGTATCTTTTGTTGTTGTTTATATACTGTGTTTTTTGTCTGATATATATCTTCCTATGAAAGATAACCTGAGGACATGTACAACAGTTTCATGGACATTTCGAGGATTTTATGAGAAGGCTGTCCTTGATTACGAGAGGCATAAAACCCATGGTGGCGAACTTAGGGTACCTATTGCTTCCAACTCAGAACCTATGAGCATCGAAAACCAGGGATCAGGATCGGGTAGAGCACGAAGAGATGCTGCTGCACGTGCCATGCAGGGTTGGCACTCGCAACGTCTCCTGGGAAATGGTGAAGTTAGTGACCCTATTATCAAGGATAAGAACTCACCTTCAATGCAGAAAAAGGAAAAACAACTCAAAGGAATTGGTGGTATTCTTAAACGTAAGAAACCGTCTTACATGGAGCATACTGTGAAATCGGCACGAACAAAATCATCAAAACCACAGTTGGACGTAGCAGTAGTTGATATTGGACAACCAGCTGATTGGGTCAAGGTCAATGTGCAGAAAACTAAAGATTGTTATGAGGTCTATGCATTAGTCCCCGGACTACTTCGTGAGGAGGTGCGCGTTCAGTCCGATCCAGCAGGACGCTTGGTTATTAGCGGTGAACCTGAACATCCTGATAATCCATGGGGTGTCACGCCCTTTAAAAAGGTGGTCAGCCTACCATCAAGGATTGATCCGCATCAGACTTCTGCCGTTGTCACCTTACATGGGCAGTTGTTTGTTCGCGTTCCATTTGAACAGCTGGAATGA | 1548 | 44.19 | MCDAMEEQESAQDIPVALGEGNQVISKDELHDSLPLPAEATPNSCENKINSPETHVQEVVPPEDNLDKSTIPQQSNQDSANSLPNHDQDLDKPDAEPASDVKTGPDELPPRELGLDAATSNTHLETVHPSLDAEAFGMPETKTGSLDDASTASHDEPVTPHPVSSCIKAETENAIELKVNEDNVATPHNGHSNMNHSFILDENQIAEGSESGTEEEQSAFMKELENFFRERGMEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVSFVVVYILCFLSDIYLPMKDNLRTCTTVSWTFRGFYEKAVLDYERHKTHGGELRVPIASNSEPMSIENQGSGSGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDKNSPSMQKKEKQLKGIGGILKRKKPSYMEHTVKSARTKSSKPQLDVAVVDIGQPADWVKVNVQKTKDCYEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQLE | 515 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 888062 | 894466 | - | Carg01163-RA | Car06g00146 | 149882 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car06g00146 | 515 | MobiDBLite | consensus disorder prediction | 85 | 109 | - | - | |
Car06g00146 | 515 | ProSiteProfiles | Small heat shock protein (sHSP) domain profile. | 415 | 515 | IPR002068 | - | |
Car06g00146 | 515 | MobiDBLite | consensus disorder prediction | 132 | 163 | - | - | |
Car06g00146 | 515 | Pfam | Hsp20/alpha crystallin family | 432 | 512 | IPR002068 | - | |
Car06g00146 | 515 | Pfam | ARID/BRIGHT DNA binding domain | 217 | 307 | IPR001606 | GO:0003677 | |
Car06g00146 | 515 | MobiDBLite | consensus disorder prediction | 361 | 381 | - | - | |
Car06g00146 | 515 | MobiDBLite | consensus disorder prediction | 325 | 344 | - | - | |
Car06g00146 | 515 | MobiDBLite | consensus disorder prediction | 67 | 84 | - | - | |
Car06g00146 | 515 | MobiDBLite | consensus disorder prediction | 1 | 114 | - | - | |
Car06g00146 | 515 | ProSiteProfiles | ARID domain profile. | 214 | 311 | IPR001606 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car01g01610 | Car-Chr1:13223074 | Car06g00146 | Car-Chr6:888062 | 1.97E-65 | dispersed | |
Car16g01214 | Car-Chr16:10219954 | Car06g00146 | Car-Chr6:888062 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
3638 | PF01388 | ARID | 5.40E-11 | CL0123 | Car | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car06g00146 | - | - | bhj:120091028 | 792.341 |