Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00147 ATGACCTTTGACATGGCTCAGAGTGCTAGGACAATGAGTTCTTCCTTTAACTCCAGCAGTGGCAACGATGATGCTCTTCTTCAAAGCTTTGCTGCTGCTTCAAATGGGGATGATTATGATAGCGATGGCTCCAACTTTGCACCCCCTACTCCTACAACCATATCGATGGCAATTCCAGCCGAACTTGCTGGGGTCATACCTTTGATTGATAGATTCCAGGTCGAAGGATTCTTAAGGATGATGCATAAACAGATACATTCTTCTGGAAAACGTGGATTCTTTTCCAAACGATCTGTAGGTCCTCAAGTTCGGGACAAATTCACATTTGAAGATATGTTGTGTTTCCAAAAGGATCCAATACCAACTTCATTACTTAAAATTAACTCTGACTTGGTGAGCCGAGCCATTAAACTATTCCAAATAATCTTGAAGTACATGGGTGTCGACTCATCTGATAGAGTTAATGCAATAAGCTTAGATGAACGAATTGAGCTCGTTGGAAAACTATACAAGCAAACTTTGAAACGTTCAGAGCTTCGAGATGAACTTTTTATCCAAATCTCAAAGCAAACTAGAAATTCTCCCGATTGGCAATATTTGATCAAAGCATGGGAGCTGATGTATCTATGTGCATCTGCCATGCCTCCTAGCAAGGATATTGGTGGATATCTTTCAGAGTATGTTCATAATGTTGCACAAGGCAGTAGTACTGATTCGGAGGTTCGAGTTTTTGCATTAAATACACTGAATGCTTTAAAGCGTTGCATGAAGGCGGGTCCTAGGCATATAATACCTGGTCGTGAGGAAATTGAAGCTCTTTTAACAGGGCGAAAGCTTACAACCATTGTGTTTTTCTTGGATGAAACTTTTGAAGAAATCACATACGATATGACAACAACAGTGGCTGATTCTGTTGAGGAACTTTCAGGAATTATAAAACTGTCAGCACACTCTAGCTTCAGTCTTTTTGAATGCCGTAAGATTGTCAGTGGGGCTAAAGCACTTGATCTAGGAAATGAGGAGTATGTTGGGCTTGATGATAACAAATATATTGGAGATCTGTTAGCAGAATTCAAGGCAGCAAAAGATCGAAGTAAAGGAGAAATTCTGCACTTCAAGCTGACATTTAAAAAGAAGCTGTTTCGGGAGTCTGATGAAGCTGTTGCAGACCCAATGTTTATACAGCTATCATATGTTCAGCTTCAGCATGACTATTTGTTGGGGAATTATCCTGTTGGAAGGGATGATGCTGCTCAGCTGTCAGCATTACAGATCCTGGTTGAAATTGGGTTTATTAACAGTCCAGAATCTTGCACTGATTGGAATTCGCTTCTAGAAAGATTCGTTCCCCGACAAATTGCCATAACGAGACCAAAGCGAGAGTGGGAGTTGGATATTCTCTCGCGTTATCGTTCCATGGAGCATCTGACAAAAGATGATGCAAGACAACAATTTCTTCGGATATTGAGATCGCTTCCCTACGGGAATTCTGTTTTCTTTGGCATCCGCAAGATTGATGATCCCATTGGACTTCTACCTGGGCGAATAATTTTGGGTATCAACAAAAGAGGGGTTCATTTCTTCCGTCCAGTTCCGAAGGAGTATTTACATTCTGCTGAATTAAGAGATATAATGCAGTTCGGCAGCAGTAACACTGCTGTCTTTTTTAAGATGAGAGTTGCTGGTGTCCTACACATTTTCCAGTTTGAGACCAAGCAGGGAGAAGAAATTTGCATTGCTCTGCAGACACACATAAACGATGTCATGTTGCGTCGTTACTCTAAAGCTAGATCTGCTGCTGTTGGCTCCATGCTTGGAGATTCTTCCAGCAATTTTAAGGCTCAAAGTGTGGAAGCATATGAGAAACGAGTTCATGAGTTGAGTAAAGGCATTGAAGAGTCTCAGAGAAATGCTGAACAGTTGCTGAAGGAATTGCATGAAAAGAATAAGCAAGAAGTGGTATTGCAAGAAGAAATGGAGACCTTAAAAGAATCCTTGAGATTTGAAAAGCAAAACTTAGCCGAGGCAACACGTAGTCTTGAGAGGCTCAGATCGCAGTATGATGAAAAAAACAAGGAGCACCAGGACATGTTAATGGAAAAAAGGAGTATGGAAGCAAGAATAGCCAAGTTGAGCGCCACCGTACTGGAAAATAATGTGGAAAAAGATACGGTCGGAATTAATGAACAGGTTCTACAAAAACTTCAAGATGAGTTGAGCCTTCGAAATGATGAGTTGCAAGCCACTGAAGAAATCAGAAAGAAACTGGTAAATGAAAAACTATTACTGGAACAAAGAATATTTGGACTTGAAATGACAACTAGCGACGAGATGGAACATCTTAAGAAAAGCTTTGAACATGAACGCAAAGTCTTGAAGCTGAGAGTGGCAGAACTTGAGAAGAAACTTGAAGAAATGCAAGGAGCTCAGCTAGCTGAGATGGAAGCGCTTTATAAGGAAGAGCAAATTTTAAGGAAACGCTATTTCAACATGATAGAAGATATGAAAGGAAAAATTCGAGTTTACTGTCGACTTAGACCTCTTAATGAGAAAGAAATCATTGAAAAAGAAAAGAACGTTCTTAGAAGTCTGGACGAGTTCACAGTTGAACATTCGTGGAAAGATGATAAGCCGAAGCAACATATGTATGATCGTGTATTCGATGGCACTATCTCCCAGGAAGATTATCTAGTCCAGTCTGCTGTTGATGGCTATAATGTCTGCATATTTGCTTATGGTCAAACTGGTTCTGGTAAGACCTTCACAATATATGGATCTGAGGAGAACCCTGGCTTAACACCTCGTGCCATTGGAGAACTTTTTAGAATTTTGAAGCGTGATAGTAACAAGTTCTCGTTTTCATTGAAGGCATACATGGTAGAATTATATCAAGACACGTTAGTAGATCTTCTTTTGCCGAAGAATGCAAAACGATCGAGATTAGATATCAAAAAGGATACAAAGGGAATGGTATCCATTGAAAATGTCACAATAGCTTCTATCTCAACGTTTGAAGAATTGAAAAACATTATTTATAGAGGGTCCGAGCAACGACATACTTCCGAGACTCAAATGAACGAAGAAAGTTCAAGATCACATTTGATACTTTCAATTATTATCGAAAGCACCAACCTTCAGACGCAATCCGTTTCTAAAGGAAAGCTTAGTTTTGTTGATCTTGCGGGGTCAGAGAGAGTGAAGAAGTCAGGCTCTTCTGGTAGCCAACTTAAGGAAGCTCAAAGCATAAATAAATCACTTTCAGCACTTGGGGATGTTATCAGTGCTTTGTCTTCTGGGGGTCAGCACATACCTTACAGAAATCATAAGCTAACTATGTTGATGAGCGATTCACTCGGTGGTAACGCTAAAACGCTTATGTTTGTCAACGTCTCTCCAGCTGAATCCAACTTAGACGAGACGTACAATTCTCTCATGTACGCGTCTAGAGTTCGATCGATTGTTAACGATCCAAGCCGAAACGTAGCATCGAAAGAGGTTGCTCGACTGAAAAAACTGGTTGGTTATTGGAAAGAACAAGCAGGTAGAAGGGGAGAGGTCGACGAGTTGGAAGAAATTCAAGACGAGCGACATTGTAAAGAGAAAGCGGATATCAGATATTCCATGTAA 3627 40.39 MTFDMAQSARTMSSSFNSSSGNDDALLQSFAAASNGDDYDSDGSNFAPPTPTTISMAIPAELAGVIPLIDRFQVEGFLRMMHKQIHSSGKRGFFSKRSVGPQVRDKFTFEDMLCFQKDPIPTSLLKINSDLVSRAIKLFQIILKYMGVDSSDRVNAISLDERIELVGKLYKQTLKRSELRDELFIQISKQTRNSPDWQYLIKAWELMYLCASAMPPSKDIGGYLSEYVHNVAQGSSTDSEVRVFALNTLNALKRCMKAGPRHIIPGREEIEALLTGRKLTTIVFFLDETFEEITYDMTTTVADSVEELSGIIKLSAHSSFSLFECRKIVSGAKALDLGNEEYVGLDDNKYIGDLLAEFKAAKDRSKGEILHFKLTFKKKLFRESDEAVADPMFIQLSYVQLQHDYLLGNYPVGRDDAAQLSALQILVEIGFINSPESCTDWNSLLERFVPRQIAITRPKREWELDILSRYRSMEHLTKDDARQQFLRILRSLPYGNSVFFGIRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICIALQTHINDVMLRRYSKARSAAVGSMLGDSSSNFKAQSVEAYEKRVHELSKGIEESQRNAEQLLKELHEKNKQEVVLQEEMETLKESLRFEKQNLAEATRSLERLRSQYDEKNKEHQDMLMEKRSMEARIAKLSATVLENNVEKDTVGINEQVLQKLQDELSLRNDELQATEEIRKKLVNEKLLLEQRIFGLEMTTSDEMEHLKKSFEHERKVLKLRVAELEKKLEEMQGAQLAEMEALYKEEQILRKRYFNMIEDMKGKIRVYCRLRPLNEKEIIEKEKNVLRSLDEFTVEHSWKDDKPKQHMYDRVFDGTISQEDYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSEENPGLTPRAIGELFRILKRDSNKFSFSLKAYMVELYQDTLVDLLLPKNAKRSRLDIKKDTKGMVSIENVTIASISTFEELKNIIYRGSEQRHTSETQMNEESSRSHLILSIIIESTNLQTQSVSKGKLSFVDLAGSERVKKSGSSGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETYNSLMYASRVRSIVNDPSRNVASKEVARLKKLVGYWKEQAGRRGEVDELEEIQDERHCKEKADIRYSM 1208
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 894614 904903 - Carg01162-RA Car06g00147 149883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00147 1208 Pfam FERM central domain 385 499 IPR019748 -
Car06g00147 1208 ProSiteProfiles Kinesin motor domain profile. 838 1153 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car06g00147 1208 Pfam MyTH4 domain 168 272 IPR000857 GO:0005856
Car06g00147 1208 Coils Coil 782 809 - -
Car06g00147 1208 Coils Coil 617 707 - -
Car06g00147 1208 Pfam Kinesin motor domain 844 1153 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car06g00147 1208 ProSiteProfiles FERM domain profile. 279 593 IPR000299 GO:0005856
Car06g00147 1208 Coils Coil 732 766 - -
Car06g00147 1208 ProSitePatterns Kinesin motor domain signature. 1053 1064 IPR019821 GO:0003777|GO:0005524|GO:0007018
Car06g00147 1208 ProSiteProfiles MyTH4 domain profile. 115 274 IPR000857 GO:0005856
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00147 Car-Chr6:894614 Car12g01042 Car-Chr12:10273737 4.23E-77 dispersed
Car06g00147 Car-Chr6:894614 Car05g01069 Car-Chr5:10315133 8.17E-80 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00147 - - csv:101206704 2115.12