Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00148 ATGGCTCCGGCGGCGGATCTTGAACAAACAGAGTGCTTAAAAGTCCCCTCGTCGGAGTTCTCCAACTCTGTTCTCTCCACCATCGGCGTCGTGCGCCAGGTCATGCTCATTTTCTCTCCATTCACTAAATTTCTCGGTGATTCCCGCCTTTCCACCGCCATTTCCGACTGTCTTGATTTGCTGGATTCTTCTTCCGACCAGTTGAGCTGGTCGCTCTCCGCCGCCCAAAATCCGAAGGCTAAGAACAACAGCACCGGAGATCTGAGCTCTGATCTGAAGACATGGCTGAGCGCCGCCGGAGTTAACCCAGAAACATGCATGGAAGGATTCGAAGGCACCAATAGCATTGTCAAAGGATTAGTCTCCGAAGGCATCAACCAATTAACTTCTCAGGTTTATAACCTTCTTTCCATGGTGAAATCGATCTCCAATCAACCGGCCGGAAAAGGGGAGAGCGAGTTTCCTGCCTGGCTCAAAACGGAGGAACAGAGCCTTCTGCAACAAAATGACTTCGCCGCCGATGCGACTGTGGCCGCCGATGGGACAGGGGATTTCACCACCGTGATGGAGGCGGTGCTGGCAGCCCCCGACAAGAGCATGCGACGGTATGTGATATACGTGAAAAAGGGTGTATATTTCGAGAACGTTGAGATCAAGAAGAAGAAATGGAATATCATGATGATCGGAGATGGCATTGACGCCACCGTCATATCCGGTAACCGGAGCTTCATCGACGGCTGGACGACGTTCCGGTCAGCCACCTTCGCGGTTAGTGGAAGAGGGTTCATAGCACGAGACATAACGTTCGAGAACACGGCAGGACCAGAGAAGCATCAAGCCGTGGCACTTAGGTCCGACTCGGACCTATCAGTGTTCTTTAGGTGTCGTATGAGCGGCTACCAAGACACGCTATACACGCACACCATGCGCCAATTCTACCGCGAGTGCCACATCAGCGGCACGGTCGACTTTCTCTTCGGCGACGCAACCGTGGTCTTCCAAAACTGCACCATCCTAGCCAAGAAGGGTCTACCCAACCAGAAAAACACCATCACTGCCCAAGGCCGAAAGGACCCGAATCAGCCCACCGGCTTCTCCATTCAATTCTGCAACATCTCCGCGGATTCCGACCTGCAGCCGTCGGTTAACGCCACGGCAACATACCTCGGGAGGCCATGGAAGGAATACTCAAGAACCATTATCATGCAGTCGTACATTAGCAATGCCATTAGGCCAGAAGGCTGGCTCGAGTGGAATGGCGATTTTGCTTTGAATACTTTGTTTTACGCCGAGTTTATGAATTATGGACCAGGGGCCGGGTTGGCTAAGCGCGTCAACTGGCCGGGTTACCACCGGCTGAACCAAACCAGTGAGGCTACTAACTTCACCGTGTCTCAGTTCATTGAGGGGAACCTTTGGCTGCCATCCACCGGTGTCAAGTTCACCTCAGGATTTGGAGCCAATTAA 1467 52.76 MAPAADLEQTECLKVPSSEFSNSVLSTIGVVRQVMLIFSPFTKFLGDSRLSTAISDCLDLLDSSSDQLSWSLSAAQNPKAKNNSTGDLSSDLKTWLSAAGVNPETCMEGFEGTNSIVKGLVSEGINQLTSQVYNLLSMVKSISNQPAGKGESEFPAWLKTEEQSLLQQNDFAADATVAADGTGDFTTVMEAVLAAPDKSMRRYVIYVKKGVYFENVEIKKKKWNIMMIGDGIDATVISGNRSFIDGWTTFRSATFAVSGRGFIARDITFENTAGPEKHQAVALRSDSDLSVFFRCRMSGYQDTLYTHTMRQFYRECHISGTVDFLFGDATVVFQNCTILAKKGLPNQKNTITAQGRKDPNQPTGFSIQFCNISADSDLQPSVNATATYLGRPWKEYSRTIIMQSYISNAIRPEGWLEWNGDFALNTLFYAEFMNYGPGAGLAKRVNWPGYHRLNQTSEATNFTVSQFIEGNLWLPSTGVKFTSGFGAN 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 906139 908506 - Carg01161-RA Car06g00148 149884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00148 488 Pfam Pectinesterase 174 471 IPR000070 GO:0030599|GO:0042545
Car06g00148 488 Pfam Plant invertase/pectin methylesterase inhibitor 52 137 IPR006501 GO:0004857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00148 Car-Chr6:906139 Car17g01016 Car-Chr17:8060470 8.21E-148 dispersed
Car10g00981 Car-Chr10:9319073 Car06g00148 Car-Chr6:906139 2.26E-18 dispersed
Car06g00148 Car-Chr6:906139 Car07g00252 Car-Chr7:1371909 2.72E-148 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00148 K01051 - csv:101207185 843.958