Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00151 ATGTCGGCTGTGCTAACGCTGCTACTTGTGGCTTTCTTCTACGCCGGAATTGATACCACCATTTCCCTTACTCATTTCGGCGATTCTGCGGCACTGGTGTCCCTGAAAAACGAATGGCAAAACACACCACCAAGCTGGGGAACATCAAATGATCCATGTGGAACTCCCTGGGAAGGAGTGCTTTGCAACAATTCAAGAGTCACTGCACTGAGATTATCAGCTATGGGCCTAAAAGGTAAACTTGGTGGTGACATTGGAGGCCTGTCTGAACTAAAATCATTGGACCTTTCGTTCAATACAGATCTCACTGGTTCGATCTCTCCGGCAATAGGGAAACTACAGAATTTGAATATCTTGATCCTAGCTGGGTGTGGCTTCAGTGGCAATATTCCTGAAGAACTGGGCAATCTTTCTAAGCTATCCTTCTTGGCGTTAAACTCTAACAAGTTCACCGGTACCATACCGCCATCTCTGGGAAAACTCTCCGAACTCTATTGGCTGGACCTAGCAAGTAATCAATTAACAGGCAGTATTCCTGTCTCAACTTCTGAATCTCCCGGTTTGGACCTCCTTCTGAAAGCTAAACATTTTCATTTCAACAAAAACCAGTTATCGGGTTCCATTTCGCCTAAACTTTTTAGATCTGAAATGGTGTTAATACACATATTATTTGATGGAAATAGTCTTTCTGGGAGTATCCCTCCAACTTTGGGACTTGTTAAGACCCTTGAGGTTCTTCGACTCGATCGGAATTCTCTAACAGGACCAGTCCCATCAAATCTGAACAACCTAACAAATGTCGATGAATTGAATTTAGCCAACAATAAGTTGACTGGTCCAATGCCAAACTTAACTGATATGTACTCACTAAATTATGTGGACCTTAGTAACAACTCATTTGATTCATCAGCAGCTCCGGAATGGTTCTCAAATCTACAATCGCTCACCACTCTGGTTGTTGAACATGGTTCAATACAGGGATCTGTGCCACAAGCAGTCTTTAGCTTACCACAAATACAGCAAATAAAACTGAAGAACAATTCATTCAATGGGACATTAAGTATGGGTGACACAATTAGCCCACAGTTGCAGCTTGTTGATTTGCAAAGTAACGGTATTTCCGAGTTTACCTTTGGTTCAGAATATTCCAGAACTTTGATGCTGACAGGGAATCCTGTGTGTACCACTGATAACACCCTCTCAAATACGAAATATTGCCAGCTTCGAGATCATACGACACAACCCTATTCCACCAGCCTTTTGTACTGTGGAAGTAAGTTGTGTCCTCCTGATGAGAGGTTAAACCCTCAGAGTTGTGAATGTGCCTTTCCATTTCAAGGGACTTTATACTTTAGAGCACCCTCGTTCAGGGAATTGTCGAACGTGACGTTGTTTCACTTATTGGAATCGAGTCTTTGGACCAAACTGGAGCTTACGACTGGTTCAGTTTTTATTCAAAACCCTTTCTTTAATGGTGACGATTATCTTCAGATGGAGCTTGCTCTTTTTCCGCCCAATGGGAAGTATTTTAATAGGTCGGATATTCAAAGGATTGGGTTTGCCTTGAGTAATCAAACTTACAAACCTCCCAAAGCATTTGGGCCATTTTATTTCATTGCATCCCCCTATGGTTTTCCAGACAATGCAAGGCGAACTGAAGTCAGCTCTGTAGTGATAATTGGAGTAGCTATTGGTTGTGCCATTCTCGTTCTAGGACTCATTGGAGTTGGAATATACGCGATTCGCCAAAAGAAACGTGCAGAAAAGGCCATCGTATTGAGTCGGCCATTCGCTTCTTGGGCACCAAGTGGAGACGATAGTGGAGGTGCTCCACAGTTGAAGGGAGCTAGATGGTTTTCTTATGATGAACTTAAAAAATACACAAATAGTTTCTCCATGAGCAATGAGATAGGATCTGGAGGATATGGCAAGGTATATAGAGGAGTGCTCGTGGATGGACAAGTAGTTGCGATCAAACGAGCTCAACAAGGATCAAGGCAGGGTGGCATCGAGTTCAAGACTGAAATCGAACTGCTTTCACGAGTTCATCACAAAAACCTTCTTGGCCTCATCGGATTTTGTTTCGAACAAGAAGAGCAGATGCTTGTTTATGAATTCATGCCTAATGGAACATTAAGAGATAGCCTATCTGGAAAATCTGGTATTATTCTTGATTGGAAGAGACGACTTCGTATTGCACTTGGGTCGGCCAGAGGATTGACTTACTTACACGAACTTGCTAATCCTCCCATAATCCATAGAGACATTAAATCGACCAACATTCTTTTGGACGAACATTTAAATGCAAAAGTTGCAGATTTTGGCTTGTCCAAGCTCGTCTTAGACAGTCAAAAGGGGCACGTTTCTACTCAAGTTAAAGGAACACTGGGCTATTTAGATCCTGAATATTACATGACTCAACAATTGTCTGAGAAAAGTGATGTATATAGCTTCGGAGTCGTTATGTTGGAATTGTTAACCGCTAAGCTGCCTATTCAAAAAGGAAAGTACGTAGTTCGTGAGGTGCGTACGTTGATGAACAAAAATGAAGAAGAGTATTACGGTCTGAAGCAGATCCTGGATGCCGCCATCCTAAACAACACCACGGCTATTACCGGGCTTGGAAAGTTCTTGGAGTTGGCTATGCAATGCGTTGAAGAGTCAGCTGCAGAGCGCCCCACAATGAGTGAAGTGGCTAAGGCAATTGAGAGTATTTTGCAGAGTGATGGAATAGGTACAAACGCGACAACTCCATCCACATCTGCTACTGAGTTTGGGGCTTCCAAAACTGCTCCTACGCATCCCTATAATGATCCTATAACAAAGGACACTGATGACAGTAAGGCTTTTGATTACAGTGGAGGACACACTCTTCCAACAAATGTGGAGCCCAAATAG 2898 42.79 MSAVLTLLLVAFFYAGIDTTISLTHFGDSAALVSLKNEWQNTPPSWGTSNDPCGTPWEGVLCNNSRVTALRLSAMGLKGKLGGDIGGLSELKSLDLSFNTDLTGSISPAIGKLQNLNILILAGCGFSGNIPEELGNLSKLSFLALNSNKFTGTIPPSLGKLSELYWLDLASNQLTGSIPVSTSESPGLDLLLKAKHFHFNKNQLSGSISPKLFRSEMVLIHILFDGNSLSGSIPPTLGLVKTLEVLRLDRNSLTGPVPSNLNNLTNVDELNLANNKLTGPMPNLTDMYSLNYVDLSNNSFDSSAAPEWFSNLQSLTTLVVEHGSIQGSVPQAVFSLPQIQQIKLKNNSFNGTLSMGDTISPQLQLVDLQSNGISEFTFGSEYSRTLMLTGNPVCTTDNTLSNTKYCQLRDHTTQPYSTSLLYCGSKLCPPDERLNPQSCECAFPFQGTLYFRAPSFRELSNVTLFHLLESSLWTKLELTTGSVFIQNPFFNGDDYLQMELALFPPNGKYFNRSDIQRIGFALSNQTYKPPKAFGPFYFIASPYGFPDNARRTEVSSVVIIGVAIGCAILVLGLIGVGIYAIRQKKRAEKAIVLSRPFASWAPSGDDSGGAPQLKGARWFSYDELKKYTNSFSMSNEIGSGGYGKVYRGVLVDGQVVAIKRAQQGSRQGGIEFKTEIELLSRVHHKNLLGLIGFCFEQEEQMLVYEFMPNGTLRDSLSGKSGIILDWKRRLRIALGSARGLTYLHELANPPIIHRDIKSTNILLDEHLNAKVADFGLSKLVLDSQKGHVSTQVKGTLGYLDPEYYMTQQLSEKSDVYSFGVVMLELLTAKLPIQKGKYVVREVRTLMNKNEEEYYGLKQILDAAILNNTTAITGLGKFLELAMQCVEESAAERPTMSEVAKAIESILQSDGIGTNATTPSTSATEFGASKTAPTHPYNDPITKDTDDSKAFDYSGGHTLPTNVEPK 965
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 931172 937415 - Carg01158-RA Car06g00151 149887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00151 965 Pfam Leucine rich repeat N-terminal domain 28 63 IPR013210 -
Car06g00151 965 ProSiteProfiles Protein kinase domain profile. 631 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00151 965 ProSitePatterns Protein kinases ATP-binding region signature. 637 659 IPR017441 GO:0005524
Car06g00151 965 ProSitePatterns Serine/Threonine protein kinases active-site signature. 751 763 IPR008271 GO:0004672|GO:0006468
Car06g00151 965 Pfam Protein tyrosine and serine/threonine kinase 633 900 IPR001245 GO:0004672|GO:0006468
Car06g00151 965 MobiDBLite consensus disorder prediction 910 965 - -
Car06g00151 965 Pfam Leucine rich repeat 289 348 IPR001611 GO:0005515
Car06g00151 965 MobiDBLite consensus disorder prediction 910 937 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00151 Car-Chr6:931172 Car14g01007 Car-Chr14:8275514 0 dispersed
Car14g01530 Car-Chr14:12587390 Car06g00151 Car-Chr6:931172 6.22E-07 dispersed
Car20g00883 Car-Chr20:8677069 Car06g00151 Car-Chr6:931172 9.70E-08 transposed
Car14g00001 Car-Chr14:1758 Car06g00151 Car-Chr6:931172 0 wgd
Car03g00240 Car-Chr3:3642283 Car06g00151 Car-Chr6:931172 1.76E-22 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88915 PF07714 PK_Tyr_Ser-Thr 1.10E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00151 - - csv:101220026 1603.19