Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00152 ATGGGGAACTGCGGTACCAGAGAAGAGTCTGCTGTTGTTTCCAATGCTCAAGTTCAACAGTTGCATACGTTATCGTCTTCATTGGCTGTGAAAAACGGCAGCAACAATGCTACAGATAAAAAGCATATTCATAACCGGTCCATATCAGATCTAAGCGATCCTTCGACCCCTCGCAGCCTCGAGGATTTGAGAAAGAATTCGGTGCTTTACACACACATTATTGCCTTCACATTGTTCGAGCTGGAAACTATCACCAAGAGTTTCCGTTCCGATTACATTCTGGGAGAAGGCGGATTTGGAACTGTTTATAAAGGCTACATTGACGAGAACGTCAGGGTTGGCCTCAAATCTCTTCCTGTTGCTGTCAAGGTTCTCAATAAGGAAGGCCTCCAGGGACACCGAGAATGGCTTACAGAAGTCAACTTTCTTGGTCAGCTAAGACACCCAAACCTTGTAAAGTTGATTGGTTACTGCTGCGAGGATGACCACAGATTACTTGTCTACGAGTTCATGTTTAGAGGAAGCCTTGAAAACCACCTCTTTCGAAAGACAACTGTTCCATTGCCATGGGCAAGAAGAATGATGATAGCTCTTGGAGCAGCCAAGGGTCTTGCTTTCCTACACAATGCTGAAAGGCCCGTTATCTATCGGGATTTTAAAACCTCTAATATACTGTTGGACTCTGACTATACAGCCAAGCTTTCTGATTTTGGGCTTGCGAAAGCTGGACCTCAAGGTGATGAGACACATGTTTCAACTCGAGTAATGGGTACTTATGGTTATGCTGCCCCCGAATATGTCATGACTGGCCACTTGACAGCAAGGAGTGATGTATACAGCTTTGGTGTTGTTCTTCTGGAGCTTTTAACAGGAAGAAAGTCTGTTGACAAGACAAAACCAAGCAAGGAGCAGAATTTGGTAGATTGGGCCCGACCTAAGCTAAATGACAAGAGGAAGTTGCTACAAATAATCGACCCCCGATTAGAAAACCAATACTCGACAAGGGCAGCACAGAAGGCCTGCAGCCTGGCATACTATTGCCTGAGCCAGAACCCCAAAGCAAGACCCTTAATGAGCGATGTGGTCGAAACTTTGGAACCATTACAGAGCAGTAACGGTGCAACTGAATCGGGAAGTAGCCCATTTGTTAGGGGGGGCATCCCTGATTACAGGATGCGGCCAAGGTTCGCCGACAATGTTGGTCCTGGTGGTGCCAATTGCCGGTCTCCTAACCCCACCTGTTCCCCCAGCGTCCCTGCGGCTTGTAGGGTTAGATGA 1278 46.95 MGNCGTREESAVVSNAQVQQLHTLSSSLAVKNGSNNATDKKHIHNRSISDLSDPSTPRSLEDLRKNSVLYTHIIAFTLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKTTVPLPWARRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTKPSKEQNLVDWARPKLNDKRKLLQIIDPRLENQYSTRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSNGATESGSSPFVRGGIPDYRMRPRFADNVGPGGANCRSPNPTCSPSVPAACRVR 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 938348 946728 - Carg01157-RA Car06g00152 149888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00152 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Car06g00152 425 MobiDBLite consensus disorder prediction 368 387 - -
Car06g00152 425 MobiDBLite consensus disorder prediction 35 57 - -
Car06g00152 425 PANTHER OS01G0588500 PROTEIN-RELATED 29 412 - -
Car06g00152 425 ProSitePatterns Protein kinases ATP-binding region signature. 94 123 IPR017441 GO:0005524
Car06g00152 425 Gene3D Phosphorylase Kinase; domain 1 52 170 - -
Car06g00152 425 CDD STKc_IRAK 94 368 - -
Car06g00152 425 Gene3D Transferase(Phosphotransferase) domain 1 171 380 - -
Car06g00152 425 ProSiteProfiles Protein kinase domain profile. 88 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00152 425 Pfam Protein tyrosine and serine/threonine kinase 93 365 IPR001245 GO:0004672|GO:0006468
Car06g00152 425 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL8-RELATED 29 412 - -
Car06g00152 425 SUPERFAMILY Protein kinase-like (PK-like) 64 366 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00152 Car-Chr6:938348 Car11g00610 Car-Chr11:3335484 2.86E-161 dispersed
Car08g00684 Car-Chr8:4382033 Car06g00152 Car-Chr6:938348 2.83E-134 dispersed
Car09g00319 Car-Chr9:1777465 Car06g00152 Car-Chr6:938348 1.58E-131 dispersed
Car10g00728 Car-Chr10:3801463 Car06g00152 Car-Chr6:938348 2.44E-124 dispersed
Car11g00643 Car-Chr11:3543957 Car06g00152 Car-Chr6:938348 6.45E-112 dispersed
Car17g00646 Car-Chr17:6046593 Car06g00152 Car-Chr6:938348 5.05E-131 dispersed
Car19g00282 Car-Chr19:4201026 Car06g00152 Car-Chr6:938348 3.59E-114 dispersed
Car14g00002 Car-Chr14:23627 Car06g00152 Car-Chr6:938348 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88916 PF07714 PK_Tyr_Ser-Thr 2.90E-48 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00152 - - csv:101220268 799.275