Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00170 ATGAGTTATAACGAGAAGAATCGAGGTAGAGATGGTAGGGAAACCGAGCAGCAGCCAGTTAAGAGGAACTCTGTTGACGCAGAACGGAAATCGGTCAGCCAAAATGGATCCATTACGGCTCAACAGTTGACGATTGATGAGAATCTTCTTGTCGACCCGAAATTACTATTCATTGGATCCAAGATTGGCGAGGGTGCTCATGGGAAGGTTTATGAAGGCAGGTATCGGAACAAAATTGTTGCCATTAAAGTTCTCCATCGAGGGAGTACTCCGGAAGAAAGAGCTGCACTTGAGAATCGTTTTGCTCGTGAAGTTAATATGATGTCCCGGGTAAAACATGACAATCTTGTCAAGTTTATTGGAGCTTGTAAAGAACCACTAATGGTGATAGTTACAGAGCTATTACCAGGAATGTCACTGAGGAAGTATCTGATGAATAATCGTAAGCAACGGCTGGATCCTCGGTTGGCTATTAACTTTTCTTTGGATGTTGCTCGTGCTATGGATTGTCTACATGCCAATGGGATTATACATAGAGATCTGAAACCCGACAATTTGTTGCTTACGGCAAACCAAAGGTCTGTGAAGCTTGCAGACTTTGGCCTTGCTAGAGAAGAATCTGTGACTGAGATGATGACTGCAGAAACAGGGACTTACCGCTGGATGGCTCCTGAGTTGTATAGCACTGTGACCTTGCGCCAGGGAGAGAAGAAGCATTACAACAACAAGGTCGATGTATACAGCTTTGGAATTGTCTTATGGGAACTCTTGACGAATCGAATGCCATTTGAAGGGATGTCCAATTTGCAAGCTGCATATGCTGCTGCTTTCAAGCAAGAGAGGCCTAGTATTCCAGGCGACATACCTCCTGATCTAGCATTTATAGTACAGTCGTGTTGGGTTGAAGATCCCAACATGAGGCCCAGCTTCAGCCAGATCATCCGGATGCTTAATGAATATCTATTTACACTCCCACCCCCTTTGCTATCTTCACAAGCATCTTATACAACCGAGACAGCAACGACTAGCGACGGTGCTGTAACCGAGTTCTCCGCTCGAGCAAGAGGAAAGTTTGGATTCCTTCGCCAACTGTTTGCTGCTAAAAAGGCTAAGGGCTCGCAATAA 1125 45.07 MSYNEKNRGRDGRETEQQPVKRNSVDAERKSVSQNGSITAQQLTIDENLLVDPKLLFIGSKIGEGAHGKVYEGRYRNKIVAIKVLHRGSTPEERAALENRFAREVNMMSRVKHDNLVKFIGACKEPLMVIVTELLPGMSLRKYLMNNRKQRLDPRLAINFSLDVARAMDCLHANGIIHRDLKPDNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFTLPPPLLSSQASYTTETATTSDGAVTEFSARARGKFGFLRQLFAAKKAKGSQ 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1018365 1021291 - Carg01138-RA Car06g00170 149906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00170 374 MobiDBLite consensus disorder prediction 1 37 - -
Car06g00170 374 ProSitePatterns Protein kinases ATP-binding region signature. 62 83 IPR017441 GO:0005524
Car06g00170 374 MobiDBLite consensus disorder prediction 1 28 - -
Car06g00170 374 Pfam Protein tyrosine and serine/threonine kinase 58 317 IPR001245 GO:0004672|GO:0006468
Car06g00170 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Car06g00170 374 ProSiteProfiles Protein kinase domain profile. 56 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00170 Car14g00012 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02582 Car-Chr4:20304173 Car06g00170 Car-Chr6:1018365 3.02E-135 dispersed
Car06g00170 Car-Chr6:1018365 Car10g00081 Car-Chr10:365566 9.72E-153 dispersed
Car11g00060 Car-Chr11:334803 Car06g00170 Car-Chr6:1018365 6.02E-44 dispersed
Car14g00012 Car-Chr14:73289 Car06g00170 Car-Chr6:1018365 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88919 PF07714 PK_Tyr_Ser-Thr 5.60E-61 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00170 - - cmax:111481423 659.062