Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00185 ATGCAGATTCTTGCACCAAAAATAGCTGTTTGGTGCTCTAAATCATCCAATAAGAACAGAAAATGGAAGATCCAACAATGGAGAAATGGTTATTCGTACCTCAATGCTCTGTTTTTGGCTCATCTTTTGGCTTTGTCTCTTCAATCTGTCACCGGCCAGATGTGGGATGGAGTGGCTGTTACACAAGGAGATTTTCAAGCTCTTCAAGCTATAAAGCATGAACTTATTGATGTGAAAGGAGCTTTACATAGCTGGAATGGCAGTAATGGAGCTTGTTCCGGACAGTGGGCAGGAATCAAGTGTGTGAAGGGACAAGTCATTGTCATACAGCTTCCATGGAAGGAACTCGCCGGCAGGATTTCCGACAGAATTGGGCAGCTCCGGGAACTTCGGAAGCTCAGCCTTCATGATAATGCGATCTCCGGCACCATTCCTCGGTCGGTCGGGTACCTTCCGAATCTCAGAGGAATTTATCTTTTCAACAACAGATTTTCAGGGTCTATTCCTCCTACAATTGGTAATCTTCCCCTTCTTCAAACTCTTGATTTGAGCAACAATTTCCTCACTGGAGAAATTCCTTCTAGTCTTGCAAATTCAACCAAATTGATTAGAGTTAATCTGAGCTACAATTCATTGTCGGGATCCATACCTCGAAGTTTTACGCAGTCGTTTTCTCTTGTAATTCTTGCCCTTCAGCACAATAATGTTTCTGGGATTGTCCCAGATTCTTGGGGTGGGTTTGGAAACAGAACTTGTCCACTTGGGGTTTTAACGCTTGATCATAATGTTATATCTGGAACAATTCCACCTTCTTTGACCAAATTGGAATGGCTTCAAGAGATTTCTTTCAGTGAAAATAACATCTCTGGGGTTATACCAGTCGAAATCGGCAGGCTGAAGAGGCTTCGCCGGTTGGATTTGTCGAAGAACGCCATCAATGGTGGCTTCCCTTCAAGTTTCACCAATCTGTCCTCTCTTGAGTCATTGAATGTTGAAAACAATCGCCTTGAAAGCCAGATTCCTAGAGATATTGATAGATTGCAGAATCTCTCAGTGATTAAGCTTGGGAAGAACCGTTTTAATGGGGAGATTCCTGCAAGTTTAGGGAACATTTCTGCTATTAAACATCTTGATTTCTCAGAAAATAACTTCATGGGACAGATTCCACCATCATTGACTAATTTGTTGAATCTAACATCTTTCAATGTCTCCTACAACAATCTCTCTGGTCCTGTCCCAATTCTCCTGTCTAATAAGTTCAATGCGAGCTCTTTTGTTGGGAACCTTAAACTCTGTGGCTTTAGTTCTTCAACTCCATGTCTACCTGCATCCTCCCCACAGAATATTACAAACCCATCAACCGATGTCCCGAAACTGCATCGCCACCGCAAACTAAGTGTAAAGGACATAATTCTGATAGCGGCCGGAGCTCTGTTGGTGCTTCTACTTGTTCTTTGCTCGATTTTGCTCTGTTGTTTGTTGTCAAAAAGAGCTGCTTCCAAAAAGAATGACAACATAACAGCCAAACAAGCTGCTGTGAGGAGCGTCGAGAAAGGCAGTACTGAAGTAGGGGCGAGCGAAGCTGGTGGAAAGCTAGTTCATTTTGATGGGCCATTTGTTTTCACTGCCGATGATCTTCTGTGTGCAACTGCGGAGATTATGGGCAAGAGCACATATGGAACAGCATACAAAGCAACATTAGAAGATGGTAATGAAGTAGCAGTGAAAAGATTAAGGGAAAAGACAACAAAAGGGCAGAATGAATTCGAAACTGAAGTTGCGGGACTCGGAAAAATTCGACACCCGAATCTACTTGCTCTTACAGCATACTACTTGGGCCCCAAAGGAGAGAAGCTTCTTGTCTTTGAATACATGCCTAGAGGAAGCCTCTCTTCCTTTCTTCATGCTCGCGGGCCGGAAACGACAGTCGATTGGGCAACGAGGATGAAGATAGTGATCGGAATTACGCAAGGCTTAAACTATCTCCACACAGAGGAGAATCTAATTCATGGAAACCTCACATCCAGCAACATTTTGTTGGATGATCAAACCAATGCTCGTATAGCGGATTTTGGGCTTCCTAAGCTCATGACTTCAGCTGCAGCCACAAATGTGATTGCCACTGCAGGAACACAGGGCTACAATGCACCAGAGCTAACAAAAACAAAGAAACCGACAGCAAAGACAGATGTTTACAGCCTTGGAGTCATAATATTGGAACTCTTGACAGGAAAATCACCTGGAGAAGCCATGGATGGAATGGATTTACCTCAGTGGGTGGCCTCAAAAGTGAAGGAGGAGTGGACAAATGAAGTGTTTGATTTGGAGCTGATGAAAGACACACCCAATATTGGCGATGAACTGCTGAACACTTTAAAACTAGCCCTGCATTGTGTCGATCCCTCACCAGCTGCTCGGCCCGACGTACCGCAAATTCTCCAGCAACTGGAGGAAATTAAGGCGGCTTCTACATCTGGTGATGATGGCGCCAAAGATCAACCAGCAAATGAATAG 2514 43.91 MQILAPKIAVWCSKSSNKNRKWKIQQWRNGYSYLNALFLAHLLALSLQSVTGQMWDGVAVTQGDFQALQAIKHELIDVKGALHSWNGSNGACSGQWAGIKCVKGQVIVIQLPWKELAGRISDRIGQLRELRKLSLHDNAISGTIPRSVGYLPNLRGIYLFNNRFSGSIPPTIGNLPLLQTLDLSNNFLTGEIPSSLANSTKLIRVNLSYNSLSGSIPRSFTQSFSLVILALQHNNVSGIVPDSWGGFGNRTCPLGVLTLDHNVISGTIPPSLTKLEWLQEISFSENNISGVIPVEIGRLKRLRRLDLSKNAINGGFPSSFTNLSSLESLNVENNRLESQIPRDIDRLQNLSVIKLGKNRFNGEIPASLGNISAIKHLDFSENNFMGQIPPSLTNLLNLTSFNVSYNNLSGPVPILLSNKFNASSFVGNLKLCGFSSSTPCLPASSPQNITNPSTDVPKLHRHRKLSVKDIILIAAGALLVLLLVLCSILLCCLLSKRAASKKNDNITAKQAAVRSVEKGSTEVGASEAGGKLVHFDGPFVFTADDLLCATAEIMGKSTYGTAYKATLEDGNEVAVKRLREKTTKGQNEFETEVAGLGKIRHPNLLALTAYYLGPKGEKLLVFEYMPRGSLSSFLHARGPETTVDWATRMKIVIGITQGLNYLHTEENLIHGNLTSSNILLDDQTNARIADFGLPKLMTSAAATNVIATAGTQGYNAPELTKTKKPTAKTDVYSLGVIILELLTGKSPGEAMDGMDLPQWVASKVKEEWTNEVFDLELMKDTPNIGDELLNTLKLALHCVDPSPAARPDVPQILQQLEEIKAASTSGDDGAKDQPANE 837
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1115637 1118319 + Carg01123-RA Car06g00185 149921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00185 837 Pfam Leucine rich repeat N-terminal domain 63 101 IPR013210 -
Car06g00185 837 Gene3D Transferase(Phosphotransferase) domain 1 626 834 - -
Car06g00185 837 ProSiteProfiles Protein kinase domain profile. 548 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00185 837 CDD STKc_IRAK 554 819 - -
Car06g00185 837 Gene3D Phosphorylase Kinase; domain 1 554 625 - -
Car06g00185 837 Gene3D Ribonuclease Inhibitor 254 444 IPR032675 -
Car06g00185 837 Gene3D Ribonuclease Inhibitor 61 252 IPR032675 -
Car06g00185 837 SUPERFAMILY L domain-like 86 432 - -
Car06g00185 837 Pfam Leucine rich repeat 177 235 IPR001611 GO:0005515
Car06g00185 837 Pfam Leucine rich repeat 301 360 IPR001611 GO:0005515
Car06g00185 837 Pfam Protein tyrosine and serine/threonine kinase 552 816 IPR001245 GO:0004672|GO:0006468
Car06g00185 837 SUPERFAMILY Protein kinase-like (PK-like) 552 820 IPR011009 -
Car06g00185 837 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 25 823 - -
Car06g00185 837 SMART LRR_typ_2 175 199 IPR003591 -
Car06g00185 837 SMART LRR_typ_2 299 322 IPR003591 -
Car06g00185 837 SMART LRR_typ_2 323 347 IPR003591 -
Car06g00185 837 SMART LRR_typ_2 127 151 IPR003591 -
Car06g00185 837 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 25 823 - -
Car06g00185 837 MobiDBLite consensus disorder prediction 818 837 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00287 Car06g00185 CCT
Car06g00185 Car14g00028 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00185 Car-Chr6:1115637 Car17g00105 Car-Chr17:653769 9.18E-19 dispersed
Car14g00028 Car-Chr14:179009 Car06g00185 Car-Chr6:1115637 0 wgd
Car04g00118 Car-Chr4:623801 Car06g00185 Car-Chr6:1115637 0 wgd
Car04g01016 Car-Chr4:5823672 Car06g00185 Car-Chr6:1115637 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88920 PF07714 PK_Tyr_Ser-Thr 9.40E-41 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00185 - - bhj:120090401 1407.51