Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00187 ATGGCTATAGCCTTTGCAGCTCCTTTCGCTCTTCTTTCTGTGCTCCTTTCTTTGGCTGCTCCTTCTGTGGAGTCTCCATTTACCTACCATGGATTTAACGACTCGAAACTTGCTCTTGATGGAGCGATTGTTATGAATCCATCTGGTGCGTTGAGGCTCACCAATCGATCACTTAACGCTATAGGGCATGCATTCTATCCGACTCCATTCCAGATGTTTGATAAAAATTCTGACCCATCTGCAAATGTTTCATCCTTCAACACAACTTTTGTTTTTGCAATCAATCCATCGAGCCCCGGACAAGGTGGCTTTGGCCTGGCCTTCGTCTTAGCTCCATCAACCAATTTTGAAGGTGCAGATAGTAAACACTTCCTTGGATTGTTCAACTCTACTAACGATGGTAACACTTCAAACCATATATTTGCTGTTGAATTTGACACTGTAAATGGGCATGAGGAAGACAAGAACACCAAAGGGAATCATGTTGGGATCAATATCAATGGCGTTTCATCAGTAGCATCCAAACCTGCTTCTTATTCCGACTATGGCGATGCTAATGAAAAGGACTTCCAAATGGATTCTGGTGATCCTATCATTGCTTGGATTGAGTATGATGGCCCCAACAAAATTGTGAACGTCACCGTAGCTCCCTTCACAAAACAGCAAAAGAAACCAACAGATCGACTCCTTTCCCGTCGGATTGACCTAAAAGATGTTCTAAAGGAACAAATGTTTGTTGGCTTCTCGGCTTCGACAGGAGACCAAACAAGCTCTCATTACATTTTGGGATGGAGTTTTGCAGTGAATGGACCAGCGCCGTCGTTGAATTACTCTCTCCTTCCCAACCCTCCAAAAGAGCAAGATCTTGTTCCTCCGCCATCCAATTCCCACTTCAAGGTACTCATAGCAGTTTTTTCTGTGGTGGCCATTCTAGGAATCTTTTTCTTAGCTTTCTGGTTTAGAAGAATGTGGCAAACTGAGAGGCTTGAGGATTGGGAACGAGACTGTCCTCATAGATTCAACTACAGAGATCTTTACACAGCAACAAAAGGATTCAAAAGCAGCGAGCTAATTGGAATTGGGGGGTTTGGTTCAGTATACAAAGGTCAGTTACGTTCAACTGGAATTGAGATTGCTGTGAAGAGAGTTAGAGGAAACTCGCGCCAAGGAATGAAAGAATTCGCAGCAGAAATAGAAAGCTTAGGACGACTAAGACACAAAAACTTGGTGAATCTCCAAGGATGGTGCAAGAAAAAGAACGATCTACTCGTAGTTTACGATTATATACCAAATGGAAGCCTCTATTCACTTCTATATCATCCAAAAAACAACAACATATTGAATTGGAAACAGAGATTCAACATTCTCAAAGGAATTGCAGCAGGATTATTGTACCTTCACGAAGAGTGGGAGCAGGTAGTGATCCACCGAGATGTGAAGCCAAGCAATGTTCTAATAGACGCCGACATGAATGCCCGATTGAGCGATTTCGGTCTCGCCAGGCAATACGACCACGCCGAAGAATCGCACACAACCGGCGTCGTCGGCACGATTGGCTACATAGCGCCGGAGTTGGTACGCACCGGGAAGGCTTCGAAAAACACCGATGTGTTTGGCTATGGAGTTTTGCTTCTGGAAGTGGCATGTGGAAGAAAGCCTCTGGAATCGGATCAGTTCATACTGGTAGAATGGGTGATGGAATGCTATGAAACGGGACAGATCCTGTATGCGGCTGATCCGAAGTTGAATTTGGTTTATGAGGTTGAAGAAATGGAGATGGTGCTGCAGTTAGGGCTTCTTTGTACTCACCAGAGACCAGAAGCTCGGCCGACCATGAGACAGGTCACGAGGTTCCTTCACGGCGACGATCCAGTTCCGGCGGTCGACGATTGGGCTTGTTCCCAAACTTACTCCAAATGTAACTCGAGAATTACTGAAGTGATTTCAGCAAGGTCTTATCGTTCCTTGTCCATTGGCGCCATTTCTTCTAGCTCCATAGACGCAGGCAGATAG 2013 45.01 MAIAFAAPFALLSVLLSLAAPSVESPFTYHGFNDSKLALDGAIVMNPSGALRLTNRSLNAIGHAFYPTPFQMFDKNSDPSANVSSFNTTFVFAINPSSPGQGGFGLAFVLAPSTNFEGADSKHFLGLFNSTNDGNTSNHIFAVEFDTVNGHEEDKNTKGNHVGININGVSSVASKPASYSDYGDANEKDFQMDSGDPIIAWIEYDGPNKIVNVTVAPFTKQQKKPTDRLLSRRIDLKDVLKEQMFVGFSASTGDQTSSHYILGWSFAVNGPAPSLNYSLLPNPPKEQDLVPPPSNSHFKVLIAVFSVVAILGIFFLAFWFRRMWQTERLEDWERDCPHRFNYRDLYTATKGFKSSELIGIGGFGSVYKGQLRSTGIEIAVKRVRGNSRQGMKEFAAEIESLGRLRHKNLVNLQGWCKKKNDLLVVYDYIPNGSLYSLLYHPKNNNILNWKQRFNILKGIAAGLLYLHEEWEQVVIHRDVKPSNVLIDADMNARLSDFGLARQYDHAEESHTTGVVGTIGYIAPELVRTGKASKNTDVFGYGVLLLEVACGRKPLESDQFILVEWVMECYETGQILYAADPKLNLVYEVEEMEMVLQLGLLCTHQRPEARPTMRQVTRFLHGDDPVPAVDDWACSQTYSKCNSRITEVISARSYRSLSIGAISSSSIDAGR 670
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1127848 1129860 + Carg01121-RA Car06g00187 149923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00187 670 Pfam Legume lectin domain 26 278 IPR001220 GO:0030246
Car06g00187 670 Pfam Protein kinase domain 353 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00187 670 ProSiteProfiles Protein kinase domain profile. 352 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00187 670 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Car06g00187 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00187 Car-Chr6:1127848 Car14g00102 Car-Chr14:521162 0 dispersed
Car01g00796 Car-Chr1:5221004 Car06g00187 Car-Chr6:1127848 0 transposed
Car14g00032 Car-Chr14:198919 Car06g00187 Car-Chr6:1127848 0 wgd
Car06g00187 Car-Chr6:1127848 Car07g01020 Car-Chr7:5881292 9.71E-13 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88921 PF00069 Pkinase 2.70E-52 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00187 - - cmax:111470194 1224.15