Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00199 ATGGAAGGCCACAATCCCCATCCCCTTGTTCATCTCCACCTTCAGCAGCAGCAACAGCAACAGCTTCAACATCCTCCGCCGCCACCGCCGCCGCAGCAGCAACATCTCCACCAAAACCTCGCCGATCAAACCGCCGTCAACGCCGTCGCCGACAGATTCCCTCAATGGAGTATTCAAGAAACAAAGGAGTTTTTAATGATCCGCGCCGAGCTGGATCAACGGTTCATGGAGACCAAACGCAACAAACTCTTGTGGGAAATCACCGCCGCCAAAATGAAAGAAAAGGGTTTCAATCGCAGCGCTGAACAGTGTAAATGTAAATGGAAAAACCTCGTCACCCGTTACAAGGGTTGTGAAACAATGGAGCCAGAAATTTCAAGGCAGCAATTTCCATTCTACACAGAGCTACAAGCAATTTTCGGGGCACGAATGCATCGAATATTATGGGCGGAGGCGGAGAGCGGAGGGAGTGGATCGAAGAAGAAGACGACGGTGTTATCGTCGGATGAAGATGACGAGAACGAGGACAGTGACGGGGACGGAGGCGACACGAAAGCGAGCGGTAGGAAGAGTAAGAAGAAGGGTAAAGGTAACGCCGGGGGAAGTAGTAGTATCAATCATTTGAAGGAAATTTTAGAAGATTTCATGAACCAACAAATTCAAATGGAGATTCAATGGAGGGAGGCGTTTGAATCAAGGGAAAAAGAGAGACAAATTAGGGAAATGGAATGGAGAAGGAAAATGGAAGCTTTAGAACATGAGAGGATAATGTTGGAAAGAAGATGGAGAGAAAGAGAAGAACAAAGAAGAATGAGAGATGAAGTTAGGGCTGAGAAAAGAGATGCTTTAATCACAGCTTTGTTAAACAAGCTTAGAAGAGATGATCATATATAG 894 46.42 MEGHNPHPLVHLHLQQQQQQQLQHPPPPPPPQQQHLHQNLADQTAVNAVADRFPQWSIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENEDSDGDGGDTKASGRKSKKKGKGNAGGSSSINHLKEILEDFMNQQIQMEIQWREAFESREKERQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRRDDHI 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1182338 1183366 - Carg01109-RA Car06g00199 149935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00199 297 MobiDBLite consensus disorder prediction 153 205 - -
Car06g00199 297 MobiDBLite consensus disorder prediction 14 35 - -
Car06g00199 297 ProSiteProfiles Myb-like domain profile. 56 112 IPR001005 -
Car06g00199 297 Coils Coil 241 268 - -
Car06g00199 297 Pfam Myb/SANT-like DNA-binding domain 55 139 IPR044822 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00305 Car06g00199 CCT
Car06g00199 Car14g00043 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00058 Car-Chr5:293279 Car06g00199 Car-Chr6:1182338 7.05E-14 dispersed
Car06g00199 Car-Chr6:1182338 Car04g01484 Car-Chr4:8644007 3.42E-13 dispersed
Car04g00549 Car-Chr4:3096901 Car06g00199 Car-Chr6:1182338 3.23E-40 transposed
Car14g00043 Car-Chr14:258742 Car06g00199 Car-Chr6:1182338 5.13E-117 wgd
Car03g00305 Car-Chr3:4103947 Car06g00199 Car-Chr6:1182338 3.65E-54 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3642 PF13837 Myb_DNA-bind_4 8.00E-19 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00199 - - csv:101211490 399.053