Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00205 ATGGATTTCGAACAAGAAACGCCGATCTTGCAAAACGGCGCCGTCAAGAGTTCGCTGATCGGTCGGACGGCTCACAACATGTCGTCGTCATCGCTGCGGAGAAAGTCCGATTTGACCCTCGTTTCCAAGGTTCGTTTCGGTTGTCTTAGGCTGTTGCTTGTGAATCTTCAAGAGGTCATTTTGGGAACGAAGATTTGGTTTCTTTTTCCGGCGATTCCGTTGGCTGTGTTGGCCGACTCTCTTGGCTTCGGACGAGCGTGGGTTTTCGTTCTGAGCTTATTGGGGCTTGCTCCACTTGCGGAACGCCTGAGCTTTCTGACGGAACAAATCTCATATTTCACCGGCCCCACAATTGGTGGGTTATTAAATGCCACATGTGGCAATGCGACGGAGCTAATTATAGCAATATTTGCACTTAGCAAGGATAAAATCGAGCTGGTGAAGTACTCTCTTTTCGGATCGGTTCTATCAAACCTTCTGCTCGTTCTTGGAACCTCGCTTTTCATTGGTGGCATCGTCAACCTTAAAAGACAACAAACCTATGACCAAAGACAAGCTGAGGTCAACTCACACATGTTGTTGTTGGCGCTTTTATGTCATTTGCTTCCAATGTTGTTCCCTTATGTCAGAGGGTCTACTCATGTGGTTGTAGCTGAAGCACTGCGATTGTCTAGAGCAAGTAGTATAGTAATGTTGGTGGCTTATGTAGCTTACTTGATCTTTCAACTATGGACTCACCGTGAATTTTTTGAACCCGATAAGGAACTAGAGGTATACAACGATGACATTGTGCAAGAAGCACCAACGATTGGAATATGGAGCACAGCGGCTTGGTTGGTAGGTGTTACTGTTCTCATTGCTTTGTTGTCGGAGTACGTGGTGGCTACAATTGAGGACGTTTCGAAAAGTTGGGGGCTATCGGTTGCGTTCCTTAGCATGATATTACTACCACTGGTTGGAAATGCAGCCGAGCACGCAGGAGCTCTCATATTTGCTTATAAGAACAAGTTGGATATAACTTTAGGTGTTGCTTTAGGATCTGCAACTCAAATAGCAATGTTTGTGATTCCGTTATGCGTAATTGTCGGTTGGATTATGGGAATTAATATGGATCTTAATTTTAATGTTCTTGAAACTGCCTCCCTTGCTCTTTCAATAATGGCTTCATCATCCATTTTACAGGATGGCAGTTCTCATTACATGAAGGGGTTGATTCTCATCCTCTTCTATATTATCATTGCAATATGTTTCTTCTTCACTAGTGGTAAACTCGACGAATTGCGCCTATCTGGTAAGTTTCATCGAATTTCTTCCGATTCGAGTTCGAGGATTGCTTTGATTCTTTGGTATACTTTGGAAATGGCAAATCGAAGTTTAGTGTGGAACGTTGCGAAGAAATGTTTCACACTTGGAATTATTGGCGTTACGATTTCGGATCGTTATGCGAGTGTTGTCCCTATCCGGGGTGCTTCAATGTCTCCCACTTTTAATCCTAGAGCCACTTCTCTGGCAGGACCAGTTAGTGATGACTACGTGCTGGTTGAGAAGTTTTGCCTTGAGAAGTTTCAATTTTCTCCCGGTGACGTGATTGTTTACCGATCCCCGAGTAATTACAAGGAGAAACATGTGAAAAGAGTTATTGCCTTACCAGGAGATTGGGTTGGAACTCGTCAAACATATGACGTTGTAAAGGTTCCAGAAGGACACTGTTGGGTTGAAGGTGATAATTCAGATTGCAGCATGGACTCGAGATCTTTTGGCCCGATACCAATGGGTTTGATTCAAGGTAGGGTGTCACATATTGTATGGCCACCTCAAAGAATTGGTGCTGTTGAGAGAATATACCCTCAGGGGAGAGTCAAGTCCTACTGA 1872 44.07 MDFEQETPILQNGAVKSSLIGRTAHNMSSSSLRRKSDLTLVSKVRFGCLRLLLVNLQEVILGTKIWFLFPAIPLAVLADSLGFGRAWVFVLSLLGLAPLAERLSFLTEQISYFTGPTIGGLLNATCGNATELIIAIFALSKDKIELVKYSLFGSVLSNLLLVLGTSLFIGGIVNLKRQQTYDQRQAEVNSHMLLLALLCHLLPMLFPYVRGSTHVVVAEALRLSRASSIVMLVAYVAYLIFQLWTHREFFEPDKELEVYNDDIVQEAPTIGIWSTAAWLVGVTVLIALLSEYVVATIEDVSKSWGLSVAFLSMILLPLVGNAAEHAGALIFAYKNKLDITLGVALGSATQIAMFVIPLCVIVGWIMGINMDLNFNVLETASLALSIMASSSILQDGSSHYMKGLILILFYIIIAICFFFTSGKLDELRLSGKFHRISSDSSSRIALILWYTLEMANRSLVWNVAKKCFTLGIIGVTISDRYASVVPIRGASMSPTFNPRATSLAGPVSDDYVLVEKFCLEKFQFSPGDVIVYRSPSNYKEKHVKRVIALPGDWVGTRQTYDVVKVPEGHCWVEGDNSDCSMDSRSFGPIPMGLIQGRVSHIVWPPQRIGAVERIYPQGRVKSY 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1201779 1208924 + Carg01103-RA Car06g00205 149941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00205 623 Pfam Sodium/calcium exchanger protein 86 244 IPR004837 GO:0016021|GO:0055085
Car06g00205 623 Pfam Sodium/calcium exchanger protein 277 416 IPR004837 GO:0016021|GO:0055085
Car06g00205 623 Pfam Signal peptidase, peptidase S26 563 603 IPR019533 GO:0004252|GO:0006465
Car06g00205 623 Pfam Signal peptidase, peptidase S26 462 557 IPR019533 GO:0004252|GO:0006465
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00205 Car14g00051 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00205 Car-Chr6:1201779 Car20g00598 Car-Chr20:3361033 1.12E-89 dispersed
Car01g00604 Car-Chr1:3537468 Car06g00205 Car-Chr6:1201779 2.09E-91 wgd
Car03g00308 Car-Chr3:4150213 Car06g00205 Car-Chr6:1201779 1.05E-68 wgd
Car06g00205 Car-Chr6:1201779 Car07g01042 Car-Chr7:6032943 0 wgd
Car06g00205 Car-Chr6:1201779 Car07g01042 Car-Chr7:6032943 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00205 K07300 - csv:101213176 592.808