Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00255 ATGGATCCACGCCTTAGACGACATGGTGGTTCCCTGAACGGAATTCTTTTAGATAATGGTTCTTTTTTGGTTCAATCGCAAGAGGATGGTATTGGGTCTATATTTCAGAATACCATTATGAGTCATAGCTTCCAAGAATTTAATTGCCTTCCTCCTGATCCATCACCGAGTAATATAGCCTCAAGTTCCAGCGTTATCACCTCATCTTCGAATGATGCGAGTCACGAGGAGGATTATCTGGAAGATTGCGATTTTTCTGATGCTGTTTTGACATTTATAAATCAGATTCTCATGGAAGAAGATATGGAGGACAAGACTTGCATGCTTCAAGATTCTTTGGATCTTCAAGCCGCTGAGAAACCATTCTACGAGGTTCTCGGGAAAAAGTATCCTCCTTCCCCGGAGCCAAATAGATCTCTGGGCAATCAATATAGTGATAGCTTCAATGAAGAACTTTGTGGAGATAGTAGTAATTACCTGATTGGTTACAATAATACTTCTTATTATGGTGATGATAACGCTTTTGAAACTCAGAGTGGAGATGTGTTTCGAATCAGAAGCACTTTAGGTGATACTATTTCTCCATCATCTAATAGCTCCTCAAATAGGATAATTAATGGGGATGATGGGTGGGTGGACTTCTCGAATAATGCAATTCGAGTCCCTGAGCCTAACAACAGAACCCAATCTATTTGGCAGTTCCAAAAAGGGCTTGAGGAGGCTAGCAAATTTTTACCCGGTGGAAACAACTTGTGTCTTGATTTTGAGGGAAACGAGTCAGCAACTCAGGGTTTGGATGAGGGAACGAGCCAGATGTATGTGAAGGCTGCAAGAAATGATCAGAGGAAGACTTCGTCGCTTGAGTCACGAGTAAGAAAGAATCTGCATGATGAGGATGGAGATTTGGAAGAAGAGAGAAGCAGCAAGCAAGCAGCTATATCTACAGAGTCAACCTTGCGATCTAAGATGTTTGATATTGTGTTGCTTTGTAGTGCAGGGGAGGGGCACGATCGGTTAGTTTCATTTCGACAGGAATTACAGAATGCTAAAATCAAAAGCATGCTGCAGACTGGGCAACTAAAAGAGTCTAATGGTGGGAGAGGTCGTCGGAAGAAGCAAAGTGGGAAAAAGGAGGTTGTGGATTTGAGAACTCTTCTGATTAGCTGTGCTCAAGCTGTTGCAGCTGATGACCATAGGAATGCTAGTGAGCTTCTAAAGCAGGTCAGGCAACATGCTTCTCCCTTTGGAGATGGAAATCAGAGACTGGCCAGTTATTTCGCCGATGGTCTGGAGGCACGCTTGGCAGGTACTGGTAGCCAAATTTACAAAGGTCTAATTAATAAAAGAACATCTGCTGCTGATGTTTTGAAAGCCTATCACCTGTATCTTGCGGCATGCCCATTTAGGAAGATCTCTAATTTTACTTCAAACAGGACTACAATGATTGCTTCTGAGACTGCAACTAAGCTTCACGTCATAGATTTTGGTATTCTTTATGGTTTTCAGTGGCCTACTTTAATCCAGAGACTGTCATGGAGAAAAGGAGGACCTCCAAAGCTTCGGATTACTGGAATAGAATTTCCCCAGCCTGGCTTCCGTCCAGCAGAGAGAGTTGAGGAGACAGGCCGTCGATTGGCAGCTTATGCAGAGACTTTTAACGTGCCATTTGAGTATAATGCCATAGCAAAAAAATGGGAAACTATTACAGTTGAAGATCTCAATATCGATCAGGGTGAGTTCATAGTTGTTAATTGTTTGTATCGAGCTAAAAATTTGCTTGAGGAGAGTGTTACTACAGAGAGTCCTAGAAATACTGTTCTTAGATTGATACACAAAATTAATCCTAACTTATTCATCACTGGCGTTGTCAATGGGGCATACAATGCTCCTTTCTTCGTTACCAGATTTCGAGAGGCCTTGTTTCACTTTTCTGCTATCTTTGATATGCTTGAAACTGTTGTACCTCGTGAGGATTGGGAGAGAATGCTATTGGAGAGAGAGATCTTTGGTAGGGAGGCTTTAAACGTTACAGCATGTGAGGGATGGGAGAGAGTGGAAAGACCAGAAACATACAAGCAATGGCAATTCCGGATCATGAGGGCTGGATTTGAACAACTTCCTTTTCATCCTGAGATTTTTGAGAGGGCTGTTGAAAAGGTGCGGTCAAGTTACCATAGAGATTTTTTGATTGATGAAGATAGTAGATGGATACTTCAGGGATGGAAAGGTCGAATTATATATGCCATCTCTGCATGGAAACCTACTCAAGAGTGA 2274 42.13 MDPRLRRHGGSLNGILLDNGSFLVQSQEDGIGSIFQNTIMSHSFQEFNCLPPDPSPSNIASSSSVITSSSNDASHEEDYLEDCDFSDAVLTFINQILMEEDMEDKTCMLQDSLDLQAAEKPFYEVLGKKYPPSPEPNRSLGNQYSDSFNEELCGDSSNYLIGYNNTSYYGDDNAFETQSGDVFRIRSTLGDTISPSSNSSSNRIINGDDGWVDFSNNAIRVPEPNNRTQSIWQFQKGLEEASKFLPGGNNLCLDFEGNESATQGLDEGTSQMYVKAARNDQRKTSSLESRVRKNLHDEDGDLEEERSSKQAAISTESTLRSKMFDIVLLCSAGEGHDRLVSFRQELQNAKIKSMLQTGQLKESNGGRGRRKKQSGKKEVVDLRTLLISCAQAVAADDHRNASELLKQVRQHASPFGDGNQRLASYFADGLEARLAGTGSQIYKGLINKRTSAADVLKAYHLYLAACPFRKISNFTSNRTTMIASETATKLHVIDFGILYGFQWPTLIQRLSWRKGGPPKLRITGIEFPQPGFRPAERVEETGRRLAAYAETFNVPFEYNAIAKKWETITVEDLNIDQGEFIVVNCLYRAKNLLEESVTTESPRNTVLRLIHKINPNLFITGVVNGAYNAPFFVTRFREALFHFSAIFDMLETVVPREDWERMLLEREIFGREALNVTACEGWERVERPETYKQWQFRIMRAGFEQLPFHPEIFERAVEKVRSSYHRDFLIDEDSRWILQGWKGRIIYAISAWKPTQE 757
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1446580 1448853 - Carg01053-RA Car06g00255 149991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00255 757 ProSiteProfiles GRAS family profile. 373 753 IPR005202 -
Car06g00255 757 MobiDBLite consensus disorder prediction 355 376 - -
Car06g00255 757 MobiDBLite consensus disorder prediction 277 314 - -
Car06g00255 757 MobiDBLite consensus disorder prediction 281 310 - -
Car06g00255 757 MobiDBLite consensus disorder prediction 51 73 - -
Car06g00255 757 Pfam GRAS domain family 382 753 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00255 Car14g00115 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00255 Car-Chr6:1446580 Car20g00575 Car-Chr20:3226120 1.19E-72 dispersed
Car01g00558 Car-Chr1:3292228 Car06g00255 Car-Chr6:1446580 0 wgd
Car13g00086 Car-Chr13:634221 Car06g00255 Car-Chr6:1446580 0 wgd
Car14g00115 Car-Chr14:563954 Car06g00255 Car-Chr6:1446580 0 wgd
Car02g00572 Car-Chr2:4374846 Car06g00255 Car-Chr6:1446580 4.29E-10 wgd
Car20g00340 Car-Chr20:1938505 Car06g00255 Car-Chr6:1446580 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3646 PF03514 GRAS 1.00E-115 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00255 - - csv:101205887 1257.66