Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00286 ATGGCCGCCCTCTCCACCCTCTCTCCGCCGCATCTCTCCGATCTCTCCCACTCCATTTTCTCCGACGTCCACACCAGCCGCCGTCGCCTCACCTTCATCCTCTCTTCTCCAACCCTCTTCTCCTTCACTCTCCGCCACCTCAATTCCCTTTCCCTTTCCAACAAATCTCTCCTCATCGCCCGCTTCCTTCTCTCAGCTCTCCGCCGTCTCTCCCGTCCCTTCCAGACGCCGTCGAAGTCCTTCCCCCACCACCCTTCTACCGCCGCCGTTACCCCTCGCGACCTCGACGCCGCCGTCCTCCTCCTCCTTCTCTGCGATGTACGCCAGCATAATCCGGCCGCCCTCGAAACTCCGATCACCCAATGGCGATCGACCCTCTGTCGAATCTACTCCGATTCCCTCTTGACGATCTCTGGCATCGCCACCGGCGGCGCCGGGGCCTTTATTCCGTATATTGAGACGGTGGCCAGGTGCTGGAAATTCGTGGGATTTGTTGTGAGCCGCAACGGCGGAAAGGCCCGGAGAGAGGTGGCGGCGTCGCCTGTCGCAGTGGTGGAGTTGCCGTCGGTGGCGGTGGGCGGCTGTATGGCGGTGGAATGTGTGATTTGTAAAGAGGAGATGAATGAAGGGAGAGACGCGTGTCAATTGCCTTGTGAGCACTTATTCCATTGGCTCTGTATTCTGCCATGGCTGAGGAAGAGGAACACGTGTCCCTGTTGCAGGTTTCAGCTTCCCACAGATGACATCTTCGGCGAGATCCAACGGCTCTGGGACATCCTCGTCAAGGTGGGCTCCTCATCTGATGGAGATTAA 813 58.92 MAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNSLSLSNKSLLIARFLLSALRRLSRPFQTPSKSFPHHPSTAAVTPRDLDAAVLLLLLCDVRQHNPAALETPITQWRSTLCRIYSDSLLTISGIATGGAGAFIPYIETVARCWKFVGFVVSRNGGKARREVAASPVAVVELPSVAVGGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCILPWLRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSSSDGD 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1609009 1609821 + Carg01022-RA Car06g00286 150022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00286 270 Pfam Ring finger domain 199 241 IPR001841 -
Car06g00286 270 ProSiteProfiles Zinc finger RING-type profile. 200 241 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00286 Car-Chr6:1609009 Car03g00232 Car-Chr3:3592274 8.64E-15 dispersed
Car06g00286 Car-Chr6:1609009 Car15g00217 Car-Chr15:1204428 1.15E-15 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00286 - - csv:101209757 405.986