Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00288 ACTTGCCTTTTAGAAAAAATGGTTAAACCCTGCTGGAAATCCCATGATGATGATGATTCAAACGGACGAGTCGATGGATTGTTGTGGTCTAAGGATCTAGGGCACCATGTTTATGGACAATTCTCCATGGCAGTCATCCAAGCTAATAATGTGGTGGAAGATCAAAGCCAGCTTGAATCTGGGGCATTGAGTATGTCCAATCCAGGTCCACAGGGGACCTTCGTCGGAGTTTATGACGGTCATGGTGGAACTGAAGCTTCGCGGTTCGTCAATGACAATCTCTTCAGCAATCTCAAAAGATATGCATCTTTGCACCAGAATATATCAGAAAACGTTATCAGGAAGGCTTTTGCAGCAACAGAAGAGGGATTTCTCTCTCTCGTCCAGAAACAGTGGCTTAATGAACCAAAGATTGCATCTGCTGGATCATGTTGTTTGGTGGGGATCATATGCAACGGACAGCTATATATTGCCAATGCAGGTGATTCGCGAGTAGTGCTCGGGAGAACTGAGCGAGCCACTAAAGAAATCATTGCCATTCAATTGTCCACAGAGCACAATGCGGGCATAGAATCAGTGAGAGATGAACTTCGGATGGTTCATCCAGAAGATCCTCAGATTGTGATCCTAAAACACAATGTTTGGCGTGTTGAAGGTATCATACAGGTTTCAAGATCCATTGGCGATGCATATTTGAAAAAGGCAAAGTTCAACAGACCTCCTCTGCCGCCTAAATTTCAACTGCCTGAGCCATTTTACGTACCAATCCTCAGTGCAGAACCATCAATTCTGGTGCACAAACTCCGCCCAGATGATCAATATCTCATATTTGCTTCTGATGGCCTGTGGGAGCACCTTAGCAACCAGAAGGCTGTTGACATCGTCAACAGCTATTCTCGAAATGGAATAGCAAGGAGACTTGTCAAGGCTGCACTTCGAGAAGCAGCTAAAAAAAGAGAGATGAGATATTCAGACCTGAAAAAGATAGATAGAGGTGTGAGAAGGCATTTTCACGATGACATTTCTGTTGTAGTTGTGTTCTTAGATCCTCATTTGATCAATGGTAGGCCCTCCCCTTGTTCCTTGTCAATCAGAGGAGGTCTCCCTTCGTCTGAAAATTCCTAG 1125 44.36 TCLLEKMVKPCWKSHDDDDSNGRVDGLLWSKDLGHHVYGQFSMAVIQANNVVEDQSQLESGALSMSNPGPQGTFVGVYDGHGGTEASRFVNDNLFSNLKRYASLHQNISENVIRKAFAATEEGFLSLVQKQWLNEPKIASAGSCCLVGIICNGQLYIANAGDSRVVLGRTERATKEIIAIQLSTEHNAGIESVRDELRMVHPEDPQIVILKHNVWRVEGIIQVSRSIGDAYLKKAKFNRPPLPPKFQLPEPFYVPILSAEPSILVHKLRPDDQYLIFASDGLWEHLSNQKAVDIVNSYSRNGIARRLVKAALREAAKKREMRYSDLKKIDRGVRRHFHDDISVVVVFLDPHLINGRPSPCSLSIRGGLPSSENS 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1617533 1619014 + Carg01020-RA Car06g00288 150024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00288 374 ProSitePatterns PPM-type phosphatase domain signature. 74 82 IPR000222 GO:0043169
Car06g00288 374 Pfam Protein phosphatase 2C 67 317 IPR001932 -
Car06g00288 374 ProSiteProfiles PPM-type phosphatase domain profile. 40 348 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00288 Car-Chr6:1617533 Car07g00667 Car-Chr7:3388579 0 dispersed
Car14g00153 Car-Chr14:726511 Car06g00288 Car-Chr6:1617533 0 wgd
Car04g00236 Car-Chr4:1309674 Car06g00288 Car-Chr6:1617533 0 wgd
Car04g01322 Car-Chr4:7661186 Car06g00288 Car-Chr6:1617533 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00288 K01102 - csv:101210750 691.804