Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00290 ATGGCTACTACTTTAAATGTGGTGCCGGAAGTTCGTCCGCCGTCATTAGAGGCCGACGCCGAACAGCCTCCACTCTTCGACGGAACTACCAGATTCTGCAATTTGTGGCTCTGTATCCAAAGGTTGTATATAGCTTACTATTGCCCGTTTGCACAGCGTGCTTGGATCACAAGAAATTACAAGGTGATTTCTCTGTTCAGTGCTGGGTTATTGCCTGTGATTTCTACTTACAAGCTGCTGGTTTCTCCTTTGTTTTTGGACATCATTTTTCTTCTTGGTTTTTTTGGGGGGTTGCAGGGACTACAAAACCTTCAAAACAGGCCTGCCTGGTATAAGGAAAAAGTATACCCTTCAAACAAGGTGCCAGCTTTGGAACACAATGGGAAAGTTACAGGAGAAAGCCTTGATTTGATCAAATACATAGATAGCAACTTTGAAGGACCTTCTCTTTTCCCAGATGATCCTGTTAAAAAACAATTCGGTGAAGAGTTGCTAGCTTATACTGACACATTTCTTGGGGCAGTATACCCTTCATTTAAGGGTGACCCAGTCAAGGAAGCAGGTCCTCAATTTGATTACCTGGAGGCTGCTCTGCAAAAATTTGATGATGGCCCATTCTTTTTGGGTCAATTCAGTGGGGTGGACATTGCATACATCACATTTATTGAACGGTTCCATGTTTTCTTAGCCAAGGTTTTCAACTATGATATCACAGAAGGAAGACCTAATCTAGCTGCATGGATTGAGGTAATAATTGAAACTGTGTTATTGTTTAGTGAAATACATTCTCTCTACTTTTTATATGCCTACAACATATACTTCCATACAACATATACTTCCATATTATGA 849 40.99 MATTLNVVPEVRPPSLEADAEQPPLFDGTTRFCNLWLCIQRLYIAYYCPFAQRAWITRNYKVISLFSAGLLPVISTYKLLVSPLFLDIIFLLGFFGGLQGLQNLQNRPAWYKEKVYPSNKVPALEHNGKVTGESLDLIKYIDSNFEGPSLFPDDPVKKQFGEELLAYTDTFLGAVYPSFKGDPVKEAGPQFDYLEAALQKFDDGPFFLGQFSGVDIAYITFIERFHVFLAKVFNYDITEGRPNLAAWIEVIIETVLLFSEIHSLYFLYAYNIYFHTTYTSIL 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1622391 1625033 + Carg01018-RA Car06g00290 150026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00290 282 Pfam Glutathione S-transferase, C-terminal domain 190 249 - -
Car06g00290 282 Pfam Glutathione S-transferase, N-terminal domain 42 148 IPR004045 -
Car06g00290 282 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 41 149 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00290 Car-Chr6:1622391 Car06g00291 Car-Chr6:1626700 1.47E-96 tandem
Car04g01323 Car-Chr4:7665126 Car06g00290 Car-Chr6:1622391 3.77E-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00290 K00799 - csv:101210004 342.813