Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car06g00291 | ATGGCTGCCTTCGTGGAAGAGGTTTTACCACCGTCGTTGGATGCCACCGCCGAACAACCTCCATTGTTCGATGGAACTACAAGGTTGTATACTGCTTACATTTGTCCATATGCTCAACGTGTGTGGATCACAAGGAATTACAAGGGATTACAAGATAAAATTAAGCTAGTTCCTCTCAACCTTTTTAATAGGCCTGACTGGTATAAGGAAAAAGTATACCCTACAAACAAGGTGCCAGCTCTGGAACATAATGGGAAAATTATTGGAGAAAGTATTGATCTGATCAAATATGTTGATAGCAACTTTGAAGGACCTTCTCTTCTCCCTGATGATCCTGCTAAAAAGGAGTATGCTGAAGAGTTGATATCCTACAGTGATACGTTTAATGGTGCAATAATCTCTTCGTTTAAAGGCGATACTGCAAAGGAAGCAGGTGCTCAATTTGATTATTTGGAAAATGCTTTGCAAAAATTCGATGGTCCCTTCTTCCTTGGAGAAATCAGCCAGGTGGATATAGTATACATTCCATTTGTTGAAAGATTCCAAGTTTTCTTATTGGAAGCTTTCAAGATTGACATCACAGAAGGAAGGCCTAAACTAGCTGCATGGATTGAGGAGTTCAACAAGAGTGATGCTTACAAACAAACAAAAGCCGATCCCAAGTTGGTCGTTGAAGTTTATAGGAAGCGATTCTTGGGTTAA | 702 | 40.03 | MAAFVEEVLPPSLDATAEQPPLFDGTTRLYTAYICPYAQRVWITRNYKGLQDKIKLVPLNLFNRPDWYKEKVYPTNKVPALEHNGKIIGESIDLIKYVDSNFEGPSLLPDDPAKKEYAEELISYSDTFNGAIISSFKGDTAKEAGAQFDYLENALQKFDGPFFLGEISQVDIVYIPFVERFQVFLLEAFKIDITEGRPKLAAWIEEFNKSDAYKQTKADPKLVVEVYRKRFLG | 233 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 1626700 | 1629945 | - | Carg01017-RA | Car06g00291 | 150027 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car06g00291 | 233 | Pfam | Glutathione S-transferase, N-terminal domain | 29 | 105 | IPR004045 | - | |
| Car06g00291 | 233 | Pfam | Glutathione S-transferase, C-terminal domain | 143 | 205 | - | - | |
| Car06g00291 | 233 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 25 | 106 | IPR004045 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car04g01323 | Car-Chr4:7665126 | Car06g00291 | Car-Chr6:1626700 | 9.89E-41 | dispersed | |
| Car06g00291 | Car-Chr6:1626700 | Car14g01764 | Car-Chr14:13863491 | 7.18E-09 | dispersed | |
| Car06g00290 | Car-Chr6:1622391 | Car06g00291 | Car-Chr6:1626700 | 1.47E-96 | tandem | |
| Car04g01111 | Car-Chr4:6400060 | Car06g00291 | Car-Chr6:1626700 | 2.68E-09 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car06g00291 | K00799 | - | csv:101211241 | 440.269 |