Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00297 ATGGAGGCTAAGTTTCAGTTTCTGTTTCTTCTCTTTCTTTTTGATGTCTCCTTTGCTCAGATGCCAGGTTTTGTAAGTTTGGACTGTGGAGGTCAAGAAAGTTTCACTGATGACATTGGTCTGGAATGGGTTCCAGATACTCAAGTTCGTTTTGGAGAAGCAATTAACCTATCTGTTGCAAATGAGACGAGGAAGCAATACAGGACCTTAAGACACTTCCCTGCTGATTCCAGGAAGTACTGTTACTCACTCAATGTCACTAGTAGAACACGTTACCTTCTCAGAGCAACATTTTTGTATGGTAACTTCGACAACAATAACGTGTATCCAAAATTTGACATTTCCCTTGGGGCAACTCACTGGACAACAATTGTCATATCTGACGCCAACACCATAAAGGTTCGAGAGATCATATTTCTGGCTTCAACTCCTACTGTGAGTGTTTGTTTGTCAAATGCCACAACTGGGCAGCCGTTCATATCCACGCTTGAGCTTCGACAATTTAATGGCTCTACCTACTATACTGAATTTGAGGATCAGTTTTACCTAAGTGTCTCGGCAAGGATCAATTTTGGAGCAGATTCCGAAGCCCCAGTAAGGTATCCTGATGACCCTTTTGACCGGATATGGGAGTCTGACTCTGTGAGAAAAGCAAATTATCTTGTTGATGTTGCTGCTGGTACTGAAAAAGTTTCCACTAAAATGCCAATAAATGTCAATAGAGATGAAAGACCACCTCAAAAAGTTATGCAGACGGCTGTAGTTGGCAGAAATGGTTCATTAACTTACCGTTTGAATTTGGATGGTTTTCCTGGCTTTGGATGGGCATTCACCTATTTTGCAGAAATTGAAGACTTGGGTCCTACTGATACGAGAAAATTCAGGCTTGTACTTCCCGGCATGCCTGAAATCAGCAAAGCTGTAGTCAACATTGAAGAAAATGCTCAAGGAAAATATCGGCTTTATGAGCCTGGTTTTACCAACATAACCTTCCCTTTTGTATTATCTTTTAGGTTTGGGAAAACATCAGATTCTGTGTTGGGACCTCTGTTAAATGCCATGGAGATTAACAAGTATCTTGAAAAAAGTGATGGTTCTCTAGATGGAGCAGTTGTTGCTAGTGTAATTTCAAAATTATCATCTTCAGATTTGGATGAAGGTGGTGATCCATGCATGCCATTACTGTATCTACCTTTGGCGCTTGTTAGTTTATTGTCCAAAAAGAATTTGACAGGGAACATCCCTACAGACGTTGCAAAGTTGAACTGTTTAGTTGAATTGTGGCTTGATGGAAATTCATTTGTTGGTCCTATACCCGATTTTTCTGGCTGTGTGAACTTGAAAATCCTCCATCTTGAGAACAATCAGTTGACGGGGGAGTTGCCTTCCTCATTAGTAAATCTTCCTAGTTTACGAGAGCTGTATGTGCAGAATAACATGTTATCTGGAACAGTGCCTTCCGGTCGTCTAGAAAAGGATCTAACTTTAGTCTACTCTGGAAACATTAATCTTCATGAAGGGGGGAAAAAGAACCACATTTATATCATTTTGGGTTCTGTAATTGGTGCTCTTGTCCTGCTCTTGGCAACTGTGGTATCTTGCTACTTTTTGCAAAGAAGAAGAAGAAAATCTCGTGAGCAAGCTGATGTACTTGAAGAATCCAAGCCTGCACAAAAATTTGCCTCTTCAAAGGGCGATGCTCCCAAGGAAACCGCACATTGCTTCAGTGTTAAAGAAATTGAAGAAGCAACAAGAGGTTTTGAAAGAAAAATTGGGTCCGGAGGTTTTGGTGTTGTATACTACGGGAAATTAAATGATGGAAAAGAAATTGCAGTTAAAGTCTTGACTAGTAACTCCTTCCAGGGAAAGCGAGAATTTACAAATGAGGTGACTCTTCTTTCGAGGATTCATCACAGAAATCTTGTACAATTTCTTGGATATTGTCAAGAAGTAGATAGAAGTATGCTCGTCTATGAGTATATGCACAATGGAACTCTCAAGGAACATCTTTATGCTCCACTAACACGTGGAAAAACTATCAGTTGGATAAAGCGCCTTCAGATTGCTGAAGACGCTGCCAGAGGGATCGAATACCTTCACACAGGGTGTATACCGGCTATTATTCATAGGGACTTGAAAAGCAGTAATATTCTTCTTGACCGACACATGAGAGCAAAGGTTTCAGATTTCGGTCTGTCAAAGCTTGCCGTGGATGGCGCCTCCCACGTGTCCAGCATAGTTCGGGGGACTGTTGGATACTTGGATCCAGAGTATTATATTTCTCAGCAATTGACCGACAAGAGTGATGTATATAGCTTCGGCGTTATTCTTCTCGAGTTGATATCCGGTCAAGAAGCTATATCTAACGTTAACTTTGGTGCTAATTGCCGCAACATCGTCCAGTGGGCAAAACTACACATCGAGAGCGGCGACATTCAAGGGATCATCGATCCATCGCTACGCTTCGAGTACGACATTCAATCTATGTGGAAAATCGCAGAGAAGGCTTTGATGTGTGCCCAGCCACATGGGCACCTGAGGCCATCCATGTCTGAAGTGCTTAAGGAGATACAGGATTCAATCTTGATTGAAAGAGAACCTCTTGCAAGGGAAGGTAACTCTGACGATATTTCTGGAAATTCAGTCCACTCTATGAATATAGGGCCTCTTGATTTGCGTGCAAACGAAAACTACGTGTCATTTGACGAATCCATTGCTCGACCTCTTGCAAGGTAG 2736 41.67 MEAKFQFLFLLFLFDVSFAQMPGFVSLDCGGQESFTDDIGLEWVPDTQVRFGEAINLSVANETRKQYRTLRHFPADSRKYCYSLNVTSRTRYLLRATFLYGNFDNNNVYPKFDISLGATHWTTIVISDANTIKVREIIFLASTPTVSVCLSNATTGQPFISTLELRQFNGSTYYTEFEDQFYLSVSARINFGADSEAPVRYPDDPFDRIWESDSVRKANYLVDVAAGTEKVSTKMPINVNRDERPPQKVMQTAVVGRNGSLTYRLNLDGFPGFGWAFTYFAEIEDLGPTDTRKFRLVLPGMPEISKAVVNIEENAQGKYRLYEPGFTNITFPFVLSFRFGKTSDSVLGPLLNAMEINKYLEKSDGSLDGAVVASVISKLSSSDLDEGGDPCMPLLYLPLALVSLLSKKNLTGNIPTDVAKLNCLVELWLDGNSFVGPIPDFSGCVNLKILHLENNQLTGELPSSLVNLPSLRELYVQNNMLSGTVPSGRLEKDLTLVYSGNINLHEGGKKNHIYIILGSVIGALVLLLATVVSCYFLQRRRRKSREQADVLEESKPAQKFASSKGDAPKETAHCFSVKEIEEATRGFERKIGSGGFGVVYYGKLNDGKEIAVKVLTSNSFQGKREFTNEVTLLSRIHHRNLVQFLGYCQEVDRSMLVYEYMHNGTLKEHLYAPLTRGKTISWIKRLQIAEDAARGIEYLHTGCIPAIIHRDLKSSNILLDRHMRAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNVNFGANCRNIVQWAKLHIESGDIQGIIDPSLRFEYDIQSMWKIAEKALMCAQPHGHLRPSMSEVLKEIQDSILIEREPLAREGNSDDISGNSVHSMNIGPLDLRANENYVSFDESIARPLAR 911
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1656000 1662712 + Carg01011-RA Car06g00297 150033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00297 911 Pfam Leucine rich repeat 441 481 IPR001611 GO:0005515
Car06g00297 911 ProSitePatterns Protein kinases ATP-binding region signature. 591 613 IPR017441 GO:0005524
Car06g00297 911 Pfam Protein tyrosine and serine/threonine kinase 587 791 IPR001245 GO:0004672|GO:0006468
Car06g00297 911 ProSitePatterns Serine/Threonine protein kinases active-site signature. 707 719 IPR008271 GO:0004672|GO:0006468
Car06g00297 911 ProSiteProfiles Protein kinase domain profile. 585 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00297 911 Pfam Malectin-like domain 27 357 IPR024788 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01818 Car-Chr4:10544724 Car06g00297 Car-Chr6:1656000 3.96E-07 dispersed
Car06g00297 Car-Chr6:1656000 Car01g01013 Car-Chr1:9662947 2.26E-78 dispersed
Car08g01036 Car-Chr8:7085789 Car06g00297 Car-Chr6:1656000 3.77E-40 dispersed
Car18g00670 Car-Chr18:7911490 Car06g00297 Car-Chr6:1656000 4.32E-82 dispersed
Car18g00671 Car-Chr18:7916792 Car06g00297 Car-Chr6:1656000 4.53E-13 dispersed
Car19g00461 Car-Chr19:6304986 Car06g00297 Car-Chr6:1656000 1.57E-28 dispersed
Car08g00030 Car-Chr8:141028 Car06g00297 Car-Chr6:1656000 1.23E-22 transposed
Car08g00189 Car-Chr8:1185609 Car06g00297 Car-Chr6:1656000 1.48E-98 transposed
Car14g00163 Car-Chr14:761019 Car06g00297 Car-Chr6:1656000 2.27E-36 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88927 PF12819 Malectin_like 1.00E-77 CL0202 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00297 - - csv:101212456 1616.28