Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00317 ATGGTTAATTTCTCTCCATTTTCCACGTCATTTACCTTTATATTACTTCTATTTTCCTTTTCCGGTGCTGGCATTTTCAATTCCGCCGCCGTAACCGCTGCAGCCGCCGCCGCCGCCGCCACAGAGTTCGACTTCGGCACCGTCGCCCTCAGTAGCTTGAAGCTCCTTGGCGATGCTCACTTAAATAACGGGAGCGTGATGCTTACGCGCGACCTTGCCGTCCCAAACTCCGGCGCCGGCAGAGTCCTCTACGCCCAACCTATCAGATTCCGGCAGCCAGGGATTGACTACCTCGCCAGTTTCTCCACATTTTTCTCCTTCTCCATAACGAATCTCAACCCTTCGTCGATCGGCGGCGGGCTGGCGTTTGTAATTTCACCGAACGCCGACACTGTCGGCGGCGCAGGAGGGTTCTTGGGACTGGCCGACGAGAGGGGATTGGGATTCGTGGCGGTGGAATTTGACACGTTGATGGATGTCGAATTTAAGGATATTAATGGGAACCATGTCGGATTGGATCTAAACGACATGGTTTCGTTGCAGGTTAAAGATCTGGATGGAATTGGAATCGATCTCAAAAGCGGCGATACGGTGAATTCTTGGATCGAATACGATGGGTCGTCTCGGATCTTTGAAATTTTCGTTTCTTATTCGAATTTGAAACTGACAGAACCTTTGTTGTCGTTCAATCTCGATCTCGACCCGTATTTGAACGATTTTATGTATGTCGGATTTGCCGGTTCGACTCAGGGGAGTACGGAAGTTCACAGTGTGGATTGGTGGAGTTTTACGTCGTCGTTTGACTCAAATTACCCACCGGGGGCGGTTCCGCCGCCACCGACGACGACGCTGATGAACCCAGCAGCCAATATTGCCCAGTCACCGCCGCCGACGCAGCCACCGTCAGGGTCAAATTCTGTCACGCAGAAGGACACCAAGTCGCCGTCCTGCCACAACGGACTCTGTAAGCAAAACGCCGGCGCAGTTGTCGGAGTAGTGACGGCGGGGGCATTTGTTTTAGCATTATTTGCTGGTGGGTTGATCTGGGTATATTCCAAAAAGATCAAACGGGTGAAAAAATCGGACTCCCTCGCTTCTGAAATCATCAAAACGCCGAAGGAATTCACTTACAAAGAGCTCAAAATCGCCACGAAATGCTTCAATTCGAATAGAATCATCGGCCATGGCGCTTTTGGGACTGTTTATAAAGGGATTATGCCGGAGACCGGCGACATTGTGGCGGTGAAACGGTGCAGCCATAGTACACAAGGGAAGACCGAATTTCTCTCTGAACTTTCGATCATCGGAACTCTCCGCCACCGGAATTTGGTCCGTCTTCAAGGATGGTGTCACGAAAAGGGCGAAATTCTACTAGTTTACGATTTAATGCCAAATGGGAGTTTGGATAAAGCTCTATTCGAGGCCAGAACGCCGCTGCCGTGGCCTCACCGGAAAAAAATCCTTCTCGGCGTCGCCTCCGCGTTGGCGTATTTGCATCAAGAATGTGAAAATCAGGTCATTCACAGAGACATTAAAACCAGTAACATAATGTTGGATGAAGGATTCAATGCCCGATTAGGCGATTTCGGGTTGGCCCGACAAGTGGAGCACGATAAATCACCGGACGCCACCGTCGCCGCCGGCACAATGGGGTATTTAGCCCCGGAATATCTCCTCACCGGCCGTGCAACGGAAAAAACCGACGTATTCAGCTTCGGCGCCGTAGTACTCGAAGTAGCCAGCGGCAGACGGCCAATCGAGAAAGAGACGGTTTCCGCCGCCCGCGGCGGAAGATTTGGCGTCAATAGTAATTTGGTCGACTGGGTTTGGAATTTACACCGAGATGGACGGTTATTGACGGCTGCCGACGGGAGACTCAGCGGCGAGTTCGACGAATCGGAGATGAGGAAAGTTTTGTTAGTCGGGTTGGCTTGTTCGCACCCGGATCCAATGACCCGACCCACAATGAGAGGCGTAGTGCAAATGTTAATCGGCGATTCAGAGATTCCGATCGTCCCTCGGTCCAAACCGTCGACTAGTTTCAGCACCGCCCATTTGCTTCTCACTTTACAAGACAGCGTGTCCGATCTCAACGGCATGATCGCTATTTCTACTTCCTCGTCCGAGGTGAGCTTCAAGGGCATGGATCTGATCTCGCTGGATGATCGGACGGTGGAGATCCATCAAACGTCAGAATAA 2199 51.52 MVNFSPFSTSFTFILLLFSFSGAGIFNSAAVTAAAAAAAATEFDFGTVALSSLKLLGDAHLNNGSVMLTRDLAVPNSGAGRVLYAQPIRFRQPGIDYLASFSTFFSFSITNLNPSSIGGGLAFVISPNADTVGGAGGFLGLADERGLGFVAVEFDTLMDVEFKDINGNHVGLDLNDMVSLQVKDLDGIGIDLKSGDTVNSWIEYDGSSRIFEIFVSYSNLKLTEPLLSFNLDLDPYLNDFMYVGFAGSTQGSTEVHSVDWWSFTSSFDSNYPPGAVPPPPTTTLMNPAANIAQSPPPTQPPSGSNSVTQKDTKSPSCHNGLCKQNAGAVVGVVTAGAFVLALFAGGLIWVYSKKIKRVKKSDSLASEIIKTPKEFTYKELKIATKCFNSNRIIGHGAFGTVYKGIMPETGDIVAVKRCSHSTQGKTEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWPHRKKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSFGAVVLEVASGRRPIEKETVSAARGGRFGVNSNLVDWVWNLHRDGRLLTAADGRLSGEFDESEMRKVLLVGLACSHPDPMTRPTMRGVVQMLIGDSEIPIVPRSKPSTSFSTAHLLLTLQDSVSDLNGMIAISTSSSEVSFKGMDLISLDDRTVEIHQTSE 732
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1745449 1747647 - Carg00991-RA Car06g00317 150053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00317 732 Pfam Legume lectin domain 42 268 IPR001220 GO:0030246
Car06g00317 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Car06g00317 732 ProSitePatterns Legume lectins beta-chain signature. 150 156 IPR019825 -
Car06g00317 732 ProSitePatterns Protein kinases ATP-binding region signature. 393 416 IPR017441 GO:0005524
Car06g00317 732 MobiDBLite consensus disorder prediction 272 316 - -
Car06g00317 732 Pfam Protein kinase domain 388 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00317 732 ProSiteProfiles Protein kinase domain profile. 387 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00317 Car14g00178 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00317 Car-Chr6:1745449 Car14g00101 Car-Chr14:517786 5.52E-137 dispersed
Car17g00092 Car-Chr17:535220 Car06g00317 Car-Chr6:1745449 8.20E-52 dispersed
Car16g00925 Car-Chr16:7586734 Car06g00317 Car-Chr6:1745449 0 transposed
Car14g00178 Car-Chr14:839291 Car06g00317 Car-Chr6:1745449 6.88E-102 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88928 PF00069 Pkinase 7.90E-51 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00317 - - cpep:111800252 1353.19