Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00323 ATGGGTAACATTGGGAGTAGCGGTTCCCATGGCCGGAGACGACACGATTCCCGTCGGGGTCATCCGACTCCACCTCCACCTCCGCCGCCACAGCCCGAAATCACAAGTAATCGGTTCGTTTTCGCCGCTGCAACGCCCTACCCATCGCAATACCCTAATCATCCGAATCAAGCGCCGCCGTACTATCAGTACCCTGGTTACTTTCCGCCGCCACCTGGTCCACCACCGTCGATGCCGATGCCCTTGCCGGCGTCTTACGACCATCAACACCGCGCTGCCCATCCCCATATGGATCCTGCGCATTGGGTCGGTGGGAGATATCCTTACGGTCCTCCTATGCCGCCCCAAACGCCCTATGTTGAGCATCAGAAGGCGGTTACCATTCGAAATGATGTTAATCTCAAGAAAGAAACTCTTAGGGTTGAGCCCGATGAAGAAAACCCCGGCCAATTCCTTGTATCTTTCTTGTTCGATGCCACCGTCGCCGGGAGTATCACCATCTTCTTCTTCGCGAAAGAAGGCGAAGATTGTAACTTGACGCCCGTAAAAGAAGACACTTTTCAACCAGTGACTGTCCATTTCGAACAAGGCCTCGGACAGAAGTACAGACAACCTTGTGGAACAGGAATAGATTTCTCAAAGTTCGAAGAGTCGGAGTTAGTGAAAGTAAATGACACAGATGTCTATCCATTAGCTGTTAAAGCCGAGGCTTCTACCGAAGGTCAAACCGGCCCCGATGGTACCGTGGTACCTGAGACCATGAATTCTCAGATAACACAGGCAGTGTTTGAGAAAGATAAAGGTGAATATCAGGTAAAAGTGTTGAAGCAAATCCTGTGGGTCAATGGTATGAGATATGAGCTGCAGGAGATCTATGGAATTGGAAATTCAGTCGAGGACGATGTCGATGGAAGCGACCCTGGAAAGGAATGTGTCATTTGCTTGTCCGAACCACGGGATACGACTGTCCTTCCCTGCCGACACATGTGTATGTGTAGTGGTTGTGCTAAGGTTTTGAGGTTCCAGACGAATCGATGCCCGATTTGCAGACAACCCGTCGATAGGCTCTTAGAGATAAGGGTCAACAATGGGGCAGAAGAATAA 1104 50.54 MGNIGSSGSHGRRRHDSRRGHPTPPPPPPPQPEITSNRFVFAAATPYPSQYPNHPNQAPPYYQYPGYFPPPPGPPPSMPMPLPASYDHQHRAAHPHMDPAHWVGGRYPYGPPMPPQTPYVEHQKAVTIRNDVNLKKETLRVEPDEENPGQFLVSFLFDATVAGSITIFFFAKEGEDCNLTPVKEDTFQPVTVHFEQGLGQKYRQPCGTGIDFSKFEESELVKVNDTDVYPLAVKAEASTEGQTGPDGTVVPETMNSQITQAVFEKDKGEYQVKVLKQILWVNGMRYELQEIYGIGNSVEDDVDGSDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVDRLLEIRVNNGAEE 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1772427 1775258 - Carg00985-RA Car06g00323 150059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00323 367 MobiDBLite consensus disorder prediction 1 58 - -
Car06g00323 367 Pfam Zinc finger, C3HC4 type (RING finger) 309 355 - -
Car06g00323 367 ProSiteProfiles Zinc finger RING-type profile. 311 350 IPR001841 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00323 Car14g00184 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00323 Car-Chr6:1772427 Car06g01236 Car-Chr6:8939866 1.78E-93 dispersed
Car14g00184 Car-Chr14:866721 Car06g00323 Car-Chr6:1772427 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00323 - - cmos:111461062 662.914