Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00324 ATGGCAACTAGGGGTCAAGGTGGTATCCAACAATTGCTTGCAGCAGAGCAAGAAGCTCAACACATTGTCAATGCTGCCAGAAATGCAAAATTGGCTAGACTGAAACAAGCTAAAGAAGAGGCTGAAAAGGAAATTGCTGCTTACCGTGCCCAAGTGGAGGCTGAGTTCCAAAGAAAACTCTCTGAGAGTAGCGGGGATTCAGGAGCTAATGTTAAGCGGCTTGAAGTCGAGACAGATGCAAAGATTGCGCACCTGAAAGAAGAGTCTGCTAGAATTTCGTACGATGTCGTGGACATGCTCCTGAAGCATGTGACAACCGTGAAAAATTGA 330 46.06 MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEKEIAAYRAQVEAEFQRKLSESSGDSGANVKRLEVETDAKIAHLKEESARISYDVVDMLLKHVTTVKN 109
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1777358 1780086 - Carg00984-RA Car06g00324 150060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00324 109 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 1 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
Car06g00324 109 Coils Coil 24 58 - -
Car06g00324 109 Pfam Vacuolar (H+)-ATPase G subunit 6 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
Car06g00324 109 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 2 109 - -
Car06g00324 109 Gene3D - 1 109 - -
Car06g00324 109 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 2 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00324 Car14g00185 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00110 Car-Chr5:582722 Car06g00324 Car-Chr6:1777358 4.58E-38 dispersed
Car14g00185 Car-Chr14:871485 Car06g00324 Car-Chr6:1777358 5.45E-69 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00324 K02152 - cmos:111461062 182.57