Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00341 ATGTCACAAGATTCCGAGGAGATAAAGACGACTGAGCAGTGGAAATGGTCCGAAATGCAAGGCCTTGAGCTCGTCTCTTCTGATCTTCCTCCTCCTCCTCCTCCTCCTCCTCTTGAACCGTTTATAACCAACAACCCATCAGCCCCAACAGCTAAACACACAGACCCTGAAGACTTCAGACCCAAAGAGGAGGCTCAAGACGGATTTGGCAGAGCTACAAACGGAGATATGGAGTCTACTAGCGATTCCAAGAAGGAAAACGGCGGTGGCACCAGTGGGGAGAAGCCTGAGGCTGTCACCGCCGTTGGGTTTGGGGAGCTCTTCAGATTCGCCGATGGGTTGGATTACGTTTTGATGGCAATTGGGTCGGTCGGAGCCCTTGTCCATGGTTGTTCTCTGCCTCTGTTTCTTCGATTCTTCGCCGATCTTGTTAACTCTTTTGGGTCTTACGCCAATGATGTGGATAAAATGATGCAGGAAGTTTTGAAGCAACTGAAATCCCTCTGCTCTAATTTCAGTATGCATTCTACTTTCTCGTGGTTGGAGCTGCTATATGGGCGTCATCCTGGGCAGCTGGGCAACTTCATCCACTATATGGCAACATTTGTTTCTGGATTCGTTGTGGGTTTCACTGCGGTGTGGCAATTGGCTTTAGTAACCCTTGCAGTGGTTCCTCTGATTGCTGTAATCGGCGGCATCTACACCACCACAATAGCGAAGCTCACTGCCAAGACCCAGGAGGCTCTTTCAGAAGCTGGAAATATTGTCGAACAGACAATAGTTCAAATTCGAGTTGTTTTTGCTTTCGTCGGCGAATCAAGAGCATTACAGAGGTACTCCTCCGCATTGAAAATTTCTCAAAGAATAGGTTACAAGAGTGGGTTCTCCAAGGGTATGGGATTGGGCGCCACTTACTTTGTCGTCTTCTGCTGTTACGCTCTTCTGCTCTGGTACGGAGGTTATCTTGTTAGACACCATGCCACCAATGGCGGTCTCGCCATTGCCACCATGTTTGCCGTGATGATTGGCGGACTGTAA 1038 48.94 MSQDSEEIKTTEQWKWSEMQGLELVSSDLPPPPPPPPLEPFITNNPSAPTAKHTDPEDFRPKEEAQDGFGRATNGDMESTSDSKKENGGGTSGEKPEAVTAVGFGELFRFADGLDYVLMAIGSVGALVHGCSLPLFLRFFADLVNSFGSYANDVDKMMQEVLKQLKSLCSNFSMHSTFSWLELLYGRHPGQLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPLIAVIGGIYTTTIAKLTAKTQEALSEAGNIVEQTIVQIRVVFAFVGESRALQRYSSALKISQRIGYKSGFSKGMGLGATYFVVFCCYALLLWYGGYLVRHHATNGGLAIATMFAVMIGGL 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1865130 1867257 - Carg00967-RA Car06g00341 150077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00341 345 MobiDBLite consensus disorder prediction 1 96 - -
Car06g00341 345 MobiDBLite consensus disorder prediction 53 69 - -
Car06g00341 345 MobiDBLite consensus disorder prediction 27 43 - -
Car06g00341 345 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 192 345 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car06g00341 345 Pfam ABC transporter transmembrane region 191 344 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00341 Car-Chr6:1865130 Car04g02658 Car-Chr4:20709554 6.20E-10 dispersed
Car14g00202 Car-Chr14:960028 Car06g00341 Car-Chr6:1865130 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00341 K05658 - qsu:112009694 436.802