Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00367 ATGGCGAATACAACTTCAAAACCCGAGAATTTGGAGCCGACCCTCTTGAAAATTGGCATTCCTCTAGCTCTATCAGCAGCTGGTGGAGTATGTTGTGGCATAATGATGGCAAGAAGTTCATTTCCCTCCTTAAATCCACTCAAACGCATAACAAAACTCATAAAGAATGAGAACTTTGACAGCCAAAATCACTCAGCTCCACTTCCTTTGAAGCAAAAAGAAACTTCACCCAATATTGAGGAAGTTCTTTTAGGCTTAAAAAACAGAGTTGAAGATCTTGAAAGAAAGGAATTGGGCATAGAGAAGCAGTTCATTTGGTACCAAAATTTGAAAGAGAAGGAAGCTTTGCTGATGGAGTTGAAGAACACATTGGTTTTGGACATGGCTCATATCAGGTTCTTGGAGAAGGAGATTTTGCTAATGGAAGAAGAAAACAAAAGGTTTGAGAGTTTGGTGACTGAATATTTGGGAGTTTCAGAGAAGTTTGAAGGCCAAAAACCAGAGAACAGGTTACTTGAGAGAGAAGTAAAGAAAGTGAAGAAGAGATTGAAGGAACAATCAAAGATGATAAGAGAGAAGAATTTGAAGATTGAAGAGAGTAGAACAGAGTTTTGGAGAAACAATGAAGAAATGGAAAGGAAGAAGAGGATGATTGAGAGATTGAGGAATGAACTAAGAGACCTCAAAATGCAAATGGAGAACAATGCTTCATCTTCTTCATCATCATTTAAGATTGAAGAAGAAAAAGAAGTGACAATGAAGGATGTTAGCAAGCTTTCAATTGGAAACCATGAACAAGAACAGCAAGAACAGAAAGAAAACCACAAGAATTTGGATCAAAAGGAATCCTCTCCTGATAAAACTACAAGACCAAAGCTCACGGAGGATGTCAACAAGCTTTCGATTGGAAACCATGAACAAGAACAACATGAACAACAAGAACAACAAGAACAGAAAGAAAAGCATAAGGATTTGGCTCAAAAGGAATCTTCTCCTAATAAAACTAAAAATACAAGGCCGAGGCTTCTTCGAAGGATAAGCGATTCTGGGAGGAAGAGACGGCCATCTCTTTTCCCTTGTCGATGTTCATTATCGTCCTCTCATGGCGGACCTTCAGAACAAGCCAAAGAATCGCTGCGGTGTGAGGGAAGAAGGGCATTGATTAGTGGTTTCCTGTCGACGGCTGCGGGTTTATATTTCTGCAGTGTAGCCCATGCTGTTAGCACAAGTCGAAGGGCTCTAAGAGGGGCAAAAGTACCTGAAAGTGAGTTTACAACTCTCCCAAATGGTCTGAAGTACTATGATTTGAAGGTTGGAGGAGGAACTAAGGCCGTGATTGGATCGCGCGTTGCAGTTCACTATGTAGCTAAATGGAGAGGGATCACATTTATGACCAGTAGACAAGGGCTTGGTGTTGGTGGAGGAACGCCTTATGGATTTGATGTAGGCCAATCAGAAAGAGGGTCAGTTCTCAAGGGATTGGATTTAGGTGTTCAAGGCATGAGGGTTGGAGGTCAGAGATTGCTTATAGTCCCTCCTGAGTTAGCTTATGGAAGCAAAGGCGTTCAGGAAATCCCTCCAAACGCAACAATCGAGAAAACGTGCCCGAGCTGCGGCTCCATTGATGTTCCTTATCCTCTTAGTACCAATTCAAACTGTGGTGACTTAGACTATACTCTCCGCTGTGATTCTCATTCACAGAGACTCTACTTTGATGCACTCAATGGAAGTTCGTATCCTGTCCTGAAAATCAATGGTTCGAGTCAACGTTTGGTGATCCAACCATCTCCGTGGGTTCCTGACTCCTGTGTTACTCAAGACATGTTGGTCAGTGAAGGCCTGTGGTTAAACCAATCACTCCCTTTTAACATCACTTCATCCAATACAATTTTCCTCTTGAACTGTTCTCCTCGACTGCTCGTCTCACCACTCAATTGTACTCCATCTAGTATCTGTCATCACTACTTGGAACGTTCTGGACGTGTTGATGGAAAACGAGCATTTCAGTGTGCTAGTGTTCTTGACCCTTGTTGTACCTTCATAGCTGGTGGGATGCCCTCAGCGTATAAGATAAGACTTCATAACTCAGGCTGTAGAGCATTCAGGAGCATCCTTCATCTAGATGTAGAAAAGCCTGCAAATCAATGGGAGGAAGGTTTGGAAATTCAATGGGCTGCCCCACCTGAACCAATCTGTAGAACTCAATCCGATTGCACTGGAGCGTCGGATTGTCGTCCTACTGGCAGCTCCAACAGCCGATCTCGTTGCCTTTGTAGAACGAGCTACCATTGGGATCATATCCTCGGAACATGCCTGAGAACAAATAGGAAGAGCATGGTTGGACTGAGTATAAAGCTCCTGGTATGTCTTGTTTCATTTTTCGTTCTAGCTGCGATTATCGCTCTAATTACTATCAGGAAGTCGAGAACATTCAGTAAGCAGGAAAAGCTGTGTAAAGAAAGAGAAGATATGTTGAATTTTAGAAATGGGGGCAGACCAGCCAGAATGTTTCATCTGAAAGAGATGAAGAAAGCAACGAATAAGTTTTCGAAAGATAGGGTCCTAGGATGCGGTGGCTTCGGAGAGGTTTACAAAGGTGAACTTCAAGACCGGACCGTTGTCGCCGTGAAGTCAGCTAAAGTAGGCAATCTAAAGAGCACCGAGCAGATACTCAACGAAGTCGGAATACTGTCTCAAGTAAACCACAAGAATCTTGTGAAACTTATAGGTTGCTGTGTAGAAACAGAGCAACCATTAATGATATATGAATACATTTCCAATGGCACCCTCCATGACCATTTACATGGTAAGTTTCCCACTTTCTTGGACTGGAGAAAAAGGCTAAAAGTTGCTTCACAAACTGCTGAAGCATTAGCTTACCTTCATTCAGCTGCATACCCTCCCATCTATCATAGAGATGTCAAGTCAACAAATATACTCTTGGATGATAACTTCAATGCCAAAGTTGCAGACTTTGGGCTTTCAAGATTGGCTTTGCCAGGAATAAGCCATGTTTCGACTTGTGCTCAGGGTACATTAGGTTACCTAGACCCAGAATACTATCAGAATTACCAGTTAACAGATAAAAGTGATGTGTATAGTTTCGGAGTTGTCCTGCTCGAGCTTTTAACCTCTCAGAAGGCCATAGATTTCACGAGAGACGAAGATAGTGTCAATCTAGCAGTGTATGTGATCCAACGAGTGCACAACGGTGCGTTCATCGACACCGTCGATAAACAGCTTCTGAGTGACGATCCATCGAGCAATACACTGATTAGTGTGAAGCACTTGTTGGAGCTCGCACTCACGTGTTTGAGGGAGAAGAAAGCGGAAAGGCCTTCCATGAAGGATGTAGTCCAGGAACTTGAGTACATAGCTCAGATATTGGAGAGTCCAGAAACAGTTGGTGAAGAAGAAGAAGAAGAAGAAGGGCAATCTTACAAAGGGTTAGAAGTTTAA 3459 42.67 MANTTSKPENLEPTLLKIGIPLALSAAGGVCCGIMMARSSFPSLNPLKRITKLIKNENFDSQNHSAPLPLKQKETSPNIEEVLLGLKNRVEDLERKELGIEKQFIWYQNLKEKEALLMELKNTLVLDMAHIRFLEKEILLMEEENKRFESLVTEYLGVSEKFEGQKPENRLLEREVKKVKKRLKEQSKMIREKNLKIEESRTEFWRNNEEMERKKRMIERLRNELRDLKMQMENNASSSSSSFKIEEEKEVTMKDVSKLSIGNHEQEQQEQKENHKNLDQKESSPDKTTRPKLTEDVNKLSIGNHEQEQHEQQEQQEQKEKHKDLAQKESSPNKTKNTRPRLLRRISDSGRKRRPSLFPCRCSLSSSHGGPSEQAKESLRCEGRRALISGFLSTAAGLYFCSVAHAVSTSRRALRGAKVPESEFTTLPNGLKYYDLKVGGGTKAVIGSRVAVHYVAKWRGITFMTSRQGLGVGGGTPYGFDVGQSERGSVLKGLDLGVQGMRVGGQRLLIVPPELAYGSKGVQEIPPNATIEKTCPSCGSIDVPYPLSTNSNCGDLDYTLRCDSHSQRLYFDALNGSSYPVLKINGSSQRLVIQPSPWVPDSCVTQDMLVSEGLWLNQSLPFNITSSNTIFLLNCSPRLLVSPLNCTPSSICHHYLERSGRVDGKRAFQCASVLDPCCTFIAGGMPSAYKIRLHNSGCRAFRSILHLDVEKPANQWEEGLEIQWAAPPEPICRTQSDCTGASDCRPTGSSNSRSRCLCRTSYHWDHILGTCLRTNRKSMVGLSIKLLVCLVSFFVLAAIIALITIRKSRTFSKQEKLCKEREDMLNFRNGGRPARMFHLKEMKKATNKFSKDRVLGCGGFGEVYKGELQDRTVVAVKSAKVGNLKSTEQILNEVGILSQVNHKNLVKLIGCCVETEQPLMIYEYISNGTLHDHLHGKFPTFLDWRKRLKVASQTAEALAYLHSAAYPPIYHRDVKSTNILLDDNFNAKVADFGLSRLALPGISHVSTCAQGTLGYLDPEYYQNYQLTDKSDVYSFGVVLLELLTSQKAIDFTRDEDSVNLAVYVIQRVHNGAFIDTVDKQLLSDDPSSNTLISVKHLLELALTCLREKKAERPSMKDVVQELEYIAQILESPETVGEEEEEEEGQSYKGLEV 1152
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2013054 2020748 - Carg00941-RA Car06g00367 150103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00367 1152 Coils Coil 76 103 - -
Car06g00367 1152 MobiDBLite consensus disorder prediction 265 330 - -
Car06g00367 1152 MobiDBLite consensus disorder prediction 1131 1152 - -
Car06g00367 1152 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 442 531 IPR001179 GO:0003755
Car06g00367 1152 Coils Coil 131 151 - -
Car06g00367 1152 Pfam Wall-associated receptor kinase galacturonan-binding 535 593 IPR025287 GO:0030247
Car06g00367 1152 MobiDBLite consensus disorder prediction 263 376 - -
Car06g00367 1152 ProSitePatterns Serine/Threonine protein kinases active-site signature. 969 981 IPR008271 GO:0004672|GO:0006468
Car06g00367 1152 Coils Coil 305 325 - -
Car06g00367 1152 MobiDBLite consensus disorder prediction 341 355 - -
Car06g00367 1152 MobiDBLite consensus disorder prediction 231 251 - -
Car06g00367 1152 Coils Coil 169 238 - -
Car06g00367 1152 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 447 531 IPR001179 GO:0003755
Car06g00367 1152 ProSiteProfiles Protein kinase domain profile. 849 1125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00367 1152 Pfam Protein tyrosine and serine/threonine kinase 851 1122 IPR001245 GO:0004672|GO:0006468
Car06g00367 1152 Coils Coil 261 281 - -
Car06g00367 1152 ProSitePatterns Protein kinases ATP-binding region signature. 855 877 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00914 Car-Chr3:7211307 Car06g00367 Car-Chr6:2013054 1.35E-94 dispersed
Car06g00367 Car-Chr6:2013054 Car07g00991 Car-Chr7:5647233 1.76E-177 dispersed
Car13g00331 Car-Chr13:5976562 Car06g00367 Car-Chr6:2013054 1.58E-10 dispersed
Car13g00830 Car-Chr13:8991387 Car06g00367 Car-Chr6:2013054 3.54E-12 dispersed
Car01g01598 Car-Chr1:13184312 Car06g00367 Car-Chr6:2013054 7.24E-21 transposed
Car05g00960 Car-Chr5:9189635 Car06g00367 Car-Chr6:2013054 2.71E-38 transposed
Car14g00232 Car-Chr14:1092360 Car06g00367 Car-Chr6:2013054 9.34E-75 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88929 PF07714 PK_Tyr_Ser-Thr 1.10E-48 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00367 - - cmos:111450783 1231.47