Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00369 ATGGTTCTCAAGACTGAGCTTTGTCGATTCAGTGGGGCCAAGATATACCCAGGGAGAGGCATCAGATTCATCCGGGCCGATTCTCAGGTGTTTCTCTTCGCCAACTCAAAATGCAAGAGGTACTTCCACAACCGGCTGAAGCCATCAAAGCTTACCTGGACAGCCATGTATAGGAAGCAGCACAAGAAGGATATTGCTCAAGAGGCTGTAAAGAAGAGGAGACGTGCCACCAAGAAGCCCTACTCCAGGTCCATTGTTGGTGCAACATTGGAAGTCATCCAAAAGAAGAGAGCCGAAAAGCCAGAAGTGCGTGATGCTGCTAGAGAAGCTGCTCTGCGTGAAATTAAGGAAAGGATTAAGAAAACCAAGGACGAAAAGAAGGCCAAGAAGGCAGAAGTGATTGCCAAGTCACAGAAGGCGCCAGGTAAGGGTAACGTTCCCAAGGGAGCTGCACCCAAGGGTCCAAAGCTGGGTGGTGGCGGTGGAAAGCGTTGA 495 50.3 MVLKTELCRFSGAKIYPGRGIRFIRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVIAKSQKAPGKGNVPKGAAPKGPKLGGGGGKR 164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2032972 2035216 + Carg00939-RA Car06g00369 150105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00369 164 MobiDBLite consensus disorder prediction 118 164 - -
Car06g00369 164 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Car06g00369 164 MobiDBLite consensus disorder prediction 118 136 - -
Car06g00369 164 Coils Coil 112 132 - -
Car06g00369 164 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01068 Car06g00369 CCT
Car03g01068 Car06g00369 ECH
Car06g00369 Car14g00234 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00369 Car-Chr6:2032972 Car09g00141 Car-Chr9:681624 2.40E-19 dispersed
Car14g00234 Car-Chr14:1097428 Car06g00369 Car-Chr6:2032972 9.46E-90 wgd
Car03g01068 Car-Chr3:8687817 Car06g00369 Car-Chr6:2032972 6.26E-86 wgd
Car06g00369 Car-Chr6:2032972 Car07g00854 Car-Chr7:4527553 1.01E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00369 K02896 - csv:101206122 238.424