Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00372 ATGTCGTTTAAGTTGCATGTAGAATCATTCAAGCTCAACATGATCAATCTTATTTGTGGAGTAATTCGAATCTCAAACAAGTATTTTTGCATTGAGATATTTGATCAACAAGAATCATTCAAGCTAGACATGATCGATCTTGCTTCTGGAGTAATTCAAATCTCAAACAATGTTCTTGCCTTGAGATATTCGATCAACAAGGGATTTCTGTTTCTGGGTTTGGTTCTATTTCTGGAATTTGTAACGGCGAATCGGAGGAATTTGGGTGTGGTTTTAATGGAAAGCGATAGTTTAGGAGGCGACGGTGGAGGCGGCGGAGGAGGGATGTTTTCCGGGATGAATTCGGCAATGTTGGGATTGGATTTACCTCTTCATCCACACCCTACGAATCCACCGAATTCTCACCAATTACATCACCCTTCAATGGTGTCTTACGTCCCACAAAAGCCGCAACTCCAACAACAACCGCCGCCTACAGCCGTGAGATACCCTTACCCTGCGAAGCCCAAGCCGCAGCAGTCGAATCTCAGCGATGATGAGGAGCAGGGGTTCGCGGTGGAGGACGGCAACAGCGATGGAAAGAAGAAAATCTCCCCATGGCAGAGGATGAAATGGACGGACATGATGGTACGGCTGTTAATCACGGCGGTGTTTTACATCGGCGATGAAGGTGGAACGGAGCAAGCGGACCATGCCGGCAAGAAAAAACCAGTGGGACTGCTGCAGAAGAAGGGGAAATGGAAATCGGTTTCCAGAGCGATGATGGAGAAGGGATTTTACGTTTCGCCACAGCAATGCGAAGACAAATTCAACGATTTAAACAAGAGATATAAACGAGTTAACGACATTTTGGGGAAGGGAACCGCTTGCAGAGTCGTCGAGAATCAAACGCTATTGGATTCGATGGAATTAACACCAAAAACGAAGGAAGAAGTTCGAAAATTACTCAATTCTAAACATCTATTCTTCAGAGAAATGTGCGCTTACCACAACACTTGCCGTCACAGCACTGGCAACAACGGCGGAGGAGGCGCCCATCCTTCTCCGGACACTGCAGCAGAACCACCCTCCCACCTTCAACAAAACCAACACCAACAACAACAACAACGATGCTTCCACGCGACGGAGACCGCCGCTGCCGCGGCGACAGTAGGAGCGGACGGAGATGACGAAGATGAGGACGACGAAGAAGACGAATCGGAGGAAGATGAGGATGACGAGGAGGAGGAGGAAATTGAAGGAACTTCGAGAGGTCACGAAGAGGAGGATGAGACGGAATCGAGGAAGCGAGCGAGGAAAGGGGGGATTGCAGTGGCGGCGGCGATGCAGCAATTGAATGCAGAGGTGATCGGAGTTCTGCAGGACGGGGGAAGGAGTCCGTGGGAGAAGAAGCAGTGGATGAAGAGCCGGTTGATTCAGCTTGAAGAGCAACAGGTGAACTACCAATCGCAGGCGTTCGAGCTGGAGAAGCAGCGGCTGAAATGGCTGAAGTTCAGGAGCAAGAAGGAGAGGGATATGGAGAGGGCGAAGCTGGAGAACGAGAAGAGAAGGCTGGAGACGGAGAGGATGGCGCTAATGGTGAAGCAGAAGGAGTTGGATTGGATGGATATGCACCATTATCAGCAGCAGCATTCCTCCAATAAGCGAGGCGATCCATCGTCGATTACAGGTTGA 1674 49.46 MSFKLHVESFKLNMINLICGVIRISNKYFCIEIFDQQESFKLDMIDLASGVIQISNNVLALRYSINKGFLFLGLVLFLEFVTANRRNLGVVLMESDSLGGDGGGGGGGMFSGMNSAMLGLDLPLHPHPTNPPNSHQLHHPSMVSYVPQKPQLQQQPPPTAVRYPYPAKPKPQQSNLSDDEEQGFAVEDGNSDGKKKISPWQRMKWTDMMVRLLITAVFYIGDEGGTEQADHAGKKKPVGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQTLLDSMELTPKTKEEVRKLLNSKHLFFREMCAYHNTCRHSTGNNGGGGAHPSPDTAAEPPSHLQQNQHQQQQQRCFHATETAAAAATVGADGDDEDEDDEEDESEEDEDDEEEEEIEGTSRGHEEEDETESRKRARKGGIAVAAAMQQLNAEVIGVLQDGGRSPWEKKQWMKSRLIQLEEQQVNYQSQAFELEKQRLKWLKFRSKKERDMERAKLENEKRRLETERMALMVKQKELDWMDMHHYQQQHSSNKRGDPSSITG 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2050138 2052668 + Carg00936-RA Car06g00372 150108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00372 557 MobiDBLite consensus disorder prediction 354 374 - -
Car06g00372 557 MobiDBLite consensus disorder prediction 148 197 - -
Car06g00372 557 MobiDBLite consensus disorder prediction 537 557 - -
Car06g00372 557 MobiDBLite consensus disorder prediction 386 417 - -
Car06g00372 557 MobiDBLite consensus disorder prediction 418 433 - -
Car06g00372 557 Coils Coil 499 531 - -
Car06g00372 557 MobiDBLite consensus disorder prediction 151 165 - -
Car06g00372 557 Pfam Myb/SANT-like DNA-binding domain 202 328 IPR044822 -
Car06g00372 557 Coils Coil 471 491 - -
Car06g00372 557 MobiDBLite consensus disorder prediction 338 433 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00372 Car14g00237 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02356 Car-Chr4:18939607 Car06g00372 Car-Chr6:2050138 2.43E-51 dispersed
Car06g00372 Car-Chr6:2050138 Car15g00553 Car-Chr15:3054616 2.90E-80 dispersed
Car14g00237 Car-Chr14:1109659 Car06g00372 Car-Chr6:2050138 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3659 PF13837 Myb_DNA-bind_4 3.90E-21 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00372 - - cmax:111498678 796.964