Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00374 ATGGTGATGATGATGGTGAAGGAGAAGATGGAGGTGAAGATTTTCAGTTCCGCCATAGCTTTTCTTCTCTGCATTACCCTTTTGATTTCACCTTCTCTCTGTTTAGATGATACTTCTGCTCTGATTCGCTTTCGTCTTCAAGCTGATTCCCATGGCGGCCTCCTCGGAAACTGGACTGGTTCTGATGCTTGTGGTTCTTCATGGCGGGGAGTTCAGTGCTCTGTTAATGGCCGCGTTATCGCTCTTTCTCTTCCTTCTATGAACTTGCGTGGCCCCATTGAGTCTTTAGCGCCGCTCGATCAGCTCCGTGTACTCGACCTCCATGACAACCGTTTAAACGGAACCATTTCGGCGATTGTGAACTGTACGAATCTCAAGCTGTTGTATCTCTCTGGCAATGACTTCTCCGGCGAGATTCCGCCGGGATTCTCGTCTCTTAGACGACTTCTCCGACTGGATTTGTCTGATAACAACATTCGCGGCGGAATTCCTGAGGATCTCTCGAAATTGTCTCGACTTCTTACTCTCCGTTTGCAGAATAATGTCCTCTCCGGTACGGTTCCCGATCTCTCTGTTTCGCTTGTGAATCTTACTGAAGTTAATTTAACCAACAATGAACTGTACGGACGGTTACCTGACGGGATGGTGAAGAAATTCGGCGAGGAGAGTTTCGCTGGTAACGAAGGGGTCTGTGGATCGAGTCCTTTACCGATCTGTTCAGTTACTAGTTCACCGCCGGCGTCGGATTCCGGCAGAACGGTACCATCAAATCCAATCTCAATACCGAAAAACCCTAATATCAGTCCGAACATTAAGGAATCGCGAAAAGGGCTCAGCCCTGGCGCGATTGTTGCGATTGTGATCGCAAACTGCGTTGCGTTGCTCGTGATTATCTCCTTCGTCGTCGCGTATTACTGCGCTCGTGACCGGAGCTCGAGTTCCATGGCGGGAAGCGACAATGGGAAGAGAAGAAAGAGCGGAAGTAGCTACGGAAGCGAGAAAAGAGTCTACGCCAATGGCGGTGGCGACAGTGACAGTACTAACGCTACAGATAGAAGCAAACTGGTGTTCTTCGATTGGAAGAAGCAATTCGAGCTTGAAGATTTGCTGAGAGCTTCGGCGGAGATGCTCGGAAAAGGAAGCTTGGGGACGGTATACAGGGCGGTACTCGACGACGGTTGTACAGTGGCGGTGAAGAGATTGAAGGATGCAAATCCATGTCCGAGGAAGGATTTTGAACAGTACATGGATGTGATTGGGAAGCTGAAACATCAAAATATCGTTAGATTGAGAGCTTTTTACTATGCTAAAGAAGAAAAGCTTCTGGTTTACGATTATCTTCCTAATGGAAGCTTGCATTCTCTTCTCCATGGTAATCGAGGTCCAGGAAGGATTCCATTGGATTGGACGACGAGAATCAGTTTGCTTTTGGGTGCTGCTCGTGGTCTAGCAAGAATCCATGGAGAATACAGTGCTTCAAAGATCCCCCATGGCAATGTCAAGTCTTCTAACGTTCTTCTTGACAAAAATGGAGTTGCTTGCATTTCTGATTTTGGGTTGTCTCTTCTCCTCAATCCTGTCCACGCCATTGCTAGGTTGGGAGGCTACAAGGCCCCGGAACAGGACGAGACAAAACGACTCTCTCAAAAGGCAGATGTCTATAGTTTTGGTGTCTTGATGCTAGAAGTCTTGACAGGGCGTGCACCATCGCTTTACCCATCGCCTTTGCACTCACGAAACGACGAGCAAGAGCAAGCAGTAGATCTCCCGAATTGGGTTCGATCCGTGGTGAAAGAAGAGTGGACGGCTGAGGTGTTTGATCCCGAGCTATTACGGTACAAGAACATTGAGGAGGAGCTTGTGTCAATGCTTCATGTTGGGTTGGCTTGCGTTCTTCCTCAGCCCGAGAAGAGACCGACGATGGTAGAAGTGGCAAAGATGATCGAAGATATCAGGGTCGAGCAATCCCCGCTCGGAGAAGATTACGACGAATCACGTAATTCGCTTTCGCCTTCCCTTGCAACCACAGAAGATGGTATGGTGTAG 2046 48.53 MVMMMVKEKMEVKIFSSAIAFLLCITLLISPSLCLDDTSALIRFRLQADSHGGLLGNWTGSDACGSSWRGVQCSVNGRVIALSLPSMNLRGPIESLAPLDQLRVLDLHDNRLNGTISAIVNCTNLKLLYLSGNDFSGEIPPGFSSLRRLLRLDLSDNNIRGGIPEDLSKLSRLLTLRLQNNVLSGTVPDLSVSLVNLTEVNLTNNELYGRLPDGMVKKFGEESFAGNEGVCGSSPLPICSVTSSPPASDSGRTVPSNPISIPKNPNISPNIKESRKGLSPGAIVAIVIANCVALLVIISFVVAYYCARDRSSSSMAGSDNGKRRKSGSSYGSEKRVYANGGGDSDSTNATDRSKLVFFDWKKQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCPRKDFEQYMDVIGKLKHQNIVRLRAFYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLLLGAARGLARIHGEYSASKIPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYKAPEQDETKRLSQKADVYSFGVLMLEVLTGRAPSLYPSPLHSRNDEQEQAVDLPNWVRSVVKEEWTAEVFDPELLRYKNIEEELVSMLHVGLACVLPQPEKRPTMVEVAKMIEDIRVEQSPLGEDYDESRNSLSPSLATTEDGMV 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2060553 2063179 - Carg00934-RA Car06g00374 150110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00374 681 Pfam Leucine Rich repeats (2 copies) 101 136 IPR025875 -
Car06g00374 681 MobiDBLite consensus disorder prediction 311 325 - -
Car06g00374 681 MobiDBLite consensus disorder prediction 311 345 - -
Car06g00374 681 Pfam Protein kinase domain 375 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00374 681 MobiDBLite consensus disorder prediction 656 681 - -
Car06g00374 681 MobiDBLite consensus disorder prediction 242 272 - -
Car06g00374 681 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
Car06g00374 681 ProSiteProfiles Protein kinase domain profile. 371 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00374 Car14g00239 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01549 Car-Chr4:8998814 Car06g00374 Car-Chr6:2060553 1.17E-175 dispersed
Car06g00374 Car-Chr6:2060553 Car18g00926 Car-Chr18:10004979 3.50E-178 dispersed
Car14g00239 Car-Chr14:1117424 Car06g00374 Car-Chr6:2060553 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88930 PF00069 Pkinase 8.60E-33 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00374 - - bhj:120091526 1158.67