Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00385 ATGGAAATGCCCGGTAGAAGGTTGAACTATACGCTTCTTAGTCAAATTCCAGATGACCAAAACAGTGGCGGTCCTGTCAGAGCTTCGACATCGTTGATCGAATTATCATCGGGAGAGGGGAAGAACGATAAGAGGAAGTTGGAAAGAGGATTGGATTGGGAAGCTGGTGGTGATCACAGGGCGAGCCAGCAGCCGCAGGTGAATTGGATCGGCAATATGTACTCAGCCTTTGGTTTGCAGAGGCAGTCCAGTGGAAGCAGCTTTGGAGAGAGCTCGATATCCGGGGAGTATTATGCACTGACACCATCGACTACAGTGGCTAATGAGACGGATGATGTGCTTAGGATTGGAGGCGATTCAAGAGCTCAGGTAGCCGGAACTGGAGGATCCTCTGGTAAGAGCTGGGCGCAACATACGGAGGAGAGTTATCAACTGCAGTTGGCATTGGCGCTCCGGCTTTCCTCAGATGCGACTTGTGCTGATGATCCTAATTTCTTAAATCCATTTCAGGATGATTCAGCTTTAAGGAGGTCGATTAGCTCTGCTGAGGCCGTGTCACATCGATTTTGGGTGAATGGCTGTCTATCATACTTTGACAAAATTCCTGATGGGTTTTATCTAATCCATGGAATGGATCCATATGTATGGACTTTGTGCACCAGCCTGCCTGATAATGATCGCATGCCATCAATTGAATCTCTAAAGTCTGTTGATCCTAGCACAGATTCTTCAATTGAAGTTGTTTTGATTGATCAGCGCACTGATCCCAACTTAAAAGACCTCCAAAATCGGGAGTTTGGGGTGAGACATCCACGCTTTCCATTTGGAAACTTGTCTATTTCATTCAACACCAATAACTTCCTTTTTATTGTTATCAATAGTGGCTCGGTTTCTGGAGAAGATGTGTTGGTGCCCAGCTGGAAGGAGTGCAGTAATAACTTGAAGGAGACCTTAGGCTCTGTGGTTGTTCCTCTTGGTGCACTCTCTGTAGGACTCTGCCGGCATCGTGCTCTTCTTTTCAAAGTGTTAGCTGATACAATTGATTTACCCTGTCGAGTAGCCAAGGGATGTAAATATTGCTCGTGCCATGATTCTTCTTCTTGTCTTGTGCAGTTTGGGTTTGACAAGGAGTATCTGGTTGACTTAATTGGTAATCCTGGTTGCTTATATGAGCCTGATTCCTTACTCAATGGTCCCTCCTCCATTTTGATCTCCTCGCCATTGCGATTTCCACGACTAAAGCCAGTAGAGGCAGCCATTGATTTCAGGTCACTGGCTAAACAGTACTTTGCAGATTGCCAGTTACTTAATGTTGTTTTTGATGAATGTTCCTCAGTTACCATCACAGAAGTTACTGTGGATGGAGAAGATGGTGCACTTCCCTTGTATCCAGAGCAGTTTGATAGGAAGTTCACAAACAGAAGCAACCAAATGCTTGTCACTGGTGTTCATGATGAAAAATCCATTTTACTGCACGGGAAAACTTCGCAGCCTAACTCCCAAGACGGAGACTTCCAACGATTTAAACTGCTACAACCAACTATCCTGGTTGAGGATCCAATCCCACTAAAGTACAGCCGTAGAAATGTGCAGTCACCTTTTGATCTGTCCCAGCCAATGATGGATTTTACTATGGACGTAAGGTTTGCGCAGGGAGGTCAGCTAATACCAAACACTCGGAGTAAAACACTTCCCCTTGGTGCAGAGGATTTGGACATTCCATGGGAGGATCTTGTTTTAAAAGAAAGAATTGGAGCAGGTTCTTTTGGAACTGTACATCGTGCTGATTGGCATGGATCGGAAGTTGCTGTGAAGATCCTCACAGAACAAGACTTCCATCCTGAACGTGTTAATGAGTTTCTGAGAGAGGTTGCTATCATGAAATCCTTGCGACATCCCAACATTGTACTGTTTATGGGTGCCGTGACCAAGCCACCAAACCTGTCCATTGTCACTGAATATCTATCGAGAGGTAGCTTGTATAGGCTTTTGCACAAGTCAGGTGTTAAAGACATAGATGAAACACGTCGGATAAATATGGCTTATGATGTGGCAAAGGGAATGAACTATCTCCATAGACGTGACCCTCCAATTGTTCATCGTGATTTAAAATCACCAAATCTTTTAGTCGACAAGAAGTATACAGTAAAGGTTTGTGATTTTGGTCTCTCCCGCTTAAAGGCACGCACATTTCTTTCATCAAAATCCGCGGCTGGAACACCTGAGTGGATGGCACCAGAAGTACTACGTGATGAGCCCTCAAATGAAAAATCAGATGTTTACAGCTTTGGAGTGATTCTGTGGGAGTTGGCAACTTTGCAACAACCATGGTGTAATCTAAACCCAGCTCAGGTTGTTGCAGCTGTTGGATTTAAGTGCAAAAGGCTTGAAATCCCACGTAATGTAAATCCCAAATTGGCTTCCTTAATAGTGGCTTGCTGGGCCGATGAGCCGTGGAAACGTCCATCTTTCTCCAGCATAATGGAAACCTTGAAGCCAATGACTAAACAAGCACCATCTCAACAAGGCCGTGCAGACACACTCTCGGTTATGTGA 2556 44.87 MEMPGRRLNYTLLSQIPDDQNSGGPVRASTSLIELSSGEGKNDKRKLERGLDWEAGGDHRASQQPQVNWIGNMYSAFGLQRQSSGSSFGESSISGEYYALTPSTTVANETDDVLRIGGDSRAQVAGTGGSSGKSWAQHTEESYQLQLALALRLSSDATCADDPNFLNPFQDDSALRRSISSAEAVSHRFWVNGCLSYFDKIPDGFYLIHGMDPYVWTLCTSLPDNDRMPSIESLKSVDPSTDSSIEVVLIDQRTDPNLKDLQNREFGVRHPRFPFGNLSISFNTNNFLFIVINSGSVSGEDVLVPSWKECSNNLKETLGSVVVPLGALSVGLCRHRALLFKVLADTIDLPCRVAKGCKYCSCHDSSSCLVQFGFDKEYLVDLIGNPGCLYEPDSLLNGPSSILISSPLRFPRLKPVEAAIDFRSLAKQYFADCQLLNVVFDECSSVTITEVTVDGEDGALPLYPEQFDRKFTNRSNQMLVTGVHDEKSILLHGKTSQPNSQDGDFQRFKLLQPTILVEDPIPLKYSRRNVQSPFDLSQPMMDFTMDVRFAQGGQLIPNTRSKTLPLGAEDLDIPWEDLVLKERIGAGSFGTVHRADWHGSEVAVKILTEQDFHPERVNEFLREVAIMKSLRHPNIVLFMGAVTKPPNLSIVTEYLSRGSLYRLLHKSGVKDIDETRRINMAYDVAKGMNYLHRRDPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKARTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWCNLNPAQVVAAVGFKCKRLEIPRNVNPKLASLIVACWADEPWKRPSFSSIMETLKPMTKQAPSQQGRADTLSVM 851
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2099585 2107278 + Carg00923-RA Car06g00385 150121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00385 851 ProSitePatterns Protein kinases ATP-binding region signature. 584 605 IPR017441 GO:0005524
Car06g00385 851 Pfam Ethylene-responsive protein kinase Le-CTR1 182 389 - -
Car06g00385 851 ProSiteProfiles Protein kinase domain profile. 578 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00385 851 Pfam Protein tyrosine and serine/threonine kinase 579 831 IPR001245 GO:0004672|GO:0006468
Car06g00385 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g01062 Car06g00385 CCT
Car06g00385 Car14g00249 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01247 Car-Chr4:7220740 Car06g00385 Car-Chr6:2099585 0 dispersed
Car06g00385 Car-Chr6:2099585 Car09g00527 Car-Chr9:2961597 0 dispersed
Car14g00249 Car-Chr14:1156062 Car06g00385 Car-Chr6:2099585 0 wgd
Car03g01062 Car-Chr3:8641205 Car06g00385 Car-Chr6:2099585 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88931 PF07714 PK_Tyr_Ser-Thr 2.70E-70 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00385 K14510 - csv:101208452 1438.71