Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00394 ATGGATGATCAATATTCCCTTTCCGATCTCCGCCATCTCATCACTGCCCCGCTTCGCTCTCATTTCCCTTCTTCCTCAATTCCCCACCACGATCTTGCTTCTACCGCCTTTCGCCACCACCATACCCCCTATGATCTCATTCGCTCTCAACCCACCGCCGTCCTTGGTTCCGCTTCCCCTACTAGCTTCGATGCTCAAACCACCACCGCTCGGTGGCCTCGCCAAGAGACTCTCACTCTCTTGGATGTCAGATCCCGCCTCGATTCTAAGTTTAAAGAAGCTAACCAAAAAGGACCCCTTTGGGATGAAGTTTCTAGAATTATGGCTGAGGAACACAATTATCAAAGAAGTGGAAAGAAATGCAGAGAGAAGTTTGAGAATTTATATAAATATTACAAAAAAACAAAGGATGGCAAAGCTGGAAGACAAGATGGCAAAAACTACAGATTCTTCAGGCAGCTTGAAGCTCTCTATGGTGAAACCAGCAATGCCACTTCACTTCCAGACTCCCATTTTGTTGGAGATGGCAACCTTATATTCCAACAAGATGGGACTAGTAATCCAACCTCCGGTCACATGAGCTATGATGCTCAGCTGAAGCACTACTGCGACAGTCTCAGCCTCTCGAACACGTCCGAGTTTGAAACCTCTGTGTCGTCCGATGGTAATGACGAGTTTGGTTCGGTCAATGATTCGGTGGAGAAGAGGAAGAGGCGAGCTGGGAAATGCTGGAAGGTGAAGATCAAGCAGTTCATTGACTTGCAAATGAGGAAGCTAATTGATAAGCAAGAGGCTGGGTTGGAGAAGCTCATGAAGACTCTTGAACAAAAGGAGAAGGAAAGAATGGTATGGGAAGAGGAATGGAGGAAACAAGAAGTGTCAAGAATTGAGAGAGAAAGAAGCTTTTGGGCAAAGGAGAGAGCATGGATAGAAGCTAGAGATGCAGCGTTAATGGAGGCATTACAAAAGCTAACAGGCAAAGAGTTAATCACCGCCGAGCCTCATCAAAATGAAGATGGTAGTGAGATACTCAACAATTACCAAACAAAAACAATGGATCAAACCATCAAGAAACGCAAGGACAATTCAAGATCACCCACCACAACCTACAATCTTTACTTCCAAACTGATTCCTCCGTCTACGGCGGCGGTGGTCGTGGCGCCGAGATGAAAGAACAAAGTCCGAACAGCTCGAACGCCGGGGGCAGTGGCGGTGGCAGCCAAGTGGTGCAAGATAGCTGCTTTTTCTTGATGGGTGAAGGAGATCAATCTCAATCT 1278 46.71 MDDQYSLSDLRHLITAPLRSHFPSSSIPHHDLASTAFRHHHTPYDLIRSQPTAVLGSASPTSFDAQTTTARWPRQETLTLLDVRSRLDSKFKEANQKGPLWDEVSRIMAEEHNYQRSGKKCREKFENLYKYYKKTKDGKAGRQDGKNYRFFRQLEALYGETSNATSLPDSHFVGDGNLIFQQDGTSNPTSGHMSYDAQLKHYCDSLSLSNTSEFETSVSSDGNDEFGSVNDSVEKRKRRAGKCWKVKIKQFIDLQMRKLIDKQEAGLEKLMKTLEQKEKERMVWEEEWRKQEVSRIERERSFWAKERAWIEARDAALMEALQKLTGKELITAEPHQNEDGSEILNNYQTKTMDQTIKKRKDNSRSPTTTYNLYFQTDSSVYGGGGRGAEMKEQSPNSSNAGGSGGGSQVVQDSCFFLMGEGDQSQS 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2143030 2145986 - Carg00914-RA Car06g00394 150130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00394 426 Pfam Myb/SANT-like DNA-binding domain 71 157 IPR044822 -
Car06g00394 426 MobiDBLite consensus disorder prediction 381 426 - -
Car06g00394 426 Coils Coil 260 287 - -
Car06g00394 426 MobiDBLite consensus disorder prediction 391 410 - -
Car06g00394 426 ProSiteProfiles Myb-like domain profile. 64 129 IPR001005 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00394 Car14g00256 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00394 Car-Chr6:2143030 Car18g00853 Car-Chr18:9572117 4.07E-76 dispersed
Car14g00256 Car-Chr14:1196989 Car06g00394 Car-Chr6:2143030 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3663 PF13837 Myb_DNA-bind_4 3.30E-19 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00394 - - cmax:111498734 803.127