Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00403 ATGCTCAAAGGGTTCCTCTCATTCATTTCCCTCATCGCCGCCGTGGCCTCCTCAACCAACATTCCCAGAAAGGCTTATGTTGTGTATATGGGAGCATTGCCAAAGGTTCAGAGCCATGGTGTTCTTGAAGAATATCATCACAGCCTTCTTGCTAATGCAGTCGGAGATGAGGAATTGGCGAGAAAATCCAAGATTTATAGCTATGGAAGGAGCTTCAATGGCTTTGCTGCAAAGCTCTTACCCCATGAAGCCCAGAAACTAGCAAAGGAAAAAGGCGTGGTGTCTGTATTTCAGAGCACGACCAGGAAATTGCACACGACAAGATCATGGGATTTTTTGGGGCTGTCGACGGCTGCCAGCCGCCGGAACGCGGCCGCAGAGTCGGACATGATTGTCGGATTGTTGGACTCCGGGATTTGGATGGGGAGTCCCAGTTTCAAGGACGATGGCTATGGCGAAATTCCTTCCAAGTGGAAAGGCCACTGTGTCACTGGCCATAACTTTACCGGCTGCAACAGGAAAGTGATCGGCGCCCGGTTCTTCAACCTGCAGGAAATAGACGCCACAATCAACCAAAGCCCCGCGGACGAGGTGGGCCACGGCTCCCACACCTCCTCCACCGTCGCGGGAGCCACCGTAGACGGTGCCAGCCTCTACGGCATCGCCGGAGGCACCGCGCGCGGCGGCGTCCCGGCAGCGAGAATCGCCATGTACAAAGTATGCTGGAATGTAGGGTGCACGGACGCGGACCTGCTGGCCGGATTCGACCACGCAATCGCCGACGGAGTGGACATAATATCGGTGTCGATCGGTGGCGGGCTGCGGGAATTCTTCGAGGATCCGATCGCAATTGGGTCGTTTCACGCAATGGCAAAAGGGATACTGACGAGCTGCTCCGCCGGAAACAACGGGCCGGGGTTGACAACGGTGGAGAATACGGCGCCGTGGATTATGACGGTGGCGGCTTCCACCATTGATAGAGATTTCAGTACCGTTGTGAAGCTGGGAAACAATAAGAAATTATCTGGAATATCACTGAATACATTTTCAACCAAGAAGAAGATGTACCCTCTCATCAGCGGAGGAAGCGCAGCGTTACCCAATCATCCAAATGCAAGGTGGTGTGATGGTGGGAGTCTTGATAAGGGTAAAGTGGAAGGGAAAATATTGTATTGTTTGGGATCTTTAGATCAAGAATACACAGTCTCGGAGCTTGGTGGTGTCGGAGTTATAGCCAATCTTATGAACAGTACGGAGGTTCTTGCCGTCACTCCAATTCCTGCTACTCATCTTTCCTCTCAAGATTCTGACATTGTTGAAGCCTATATCAACGCCACCCAGAAGCCTAAGGCAGTGATAATGAAGACAACCACTACGAAGACAGAGGCTCCTTTCTTGGCCTATTTTTCTTCAAGAGGTCCTCAGTTCATAGCTCGTGATATCCTCAAGCCGGATGTTGCAGCACCAGGGATGAACATATTGGCGGCGAACACAAAACTGGCTACAATTCCGACCGGCAAACATTCCACTTTCGACATTATGTCTGGAACTTCAATGGCATGTCCTCATGTCGCCGCCGCCGCCGCCTATCTCAAAACCTTCCACCCCACTTGGTCCCCCGCCGCCATCAAGTCCGCCCTCATGACCACCGCGACGCCATTGAAGATCGGAGAAAGCCAAGACGAGCTGGGTGTCGGTGCCGGCCAAATAAATCCGACGAAAGCCGTCAATCCAGGCCTGATTTTCGACCTCTCTCGCACCTCTTACATCTCTTTCCTCTGCAACAAAAATCACTACGCCGGCACCGCCCTCGCCATCCTCGCCGGCGACTCCTCTTTCAACTGCTCCGCCGTCACGCCGAACACCGGCTCCGACGGCCTCAACTACCCTTCAATGTACGTCCCAGTCGACCTCCAGGCTACCGCCGTCTCCGCCGTCTTCCACCGGATTGTCACCCACGTTGGCTCCGGGCCGTCCACATACAAGGCTAAGGTGAAATCGCCGATGGGTTTGTCTGTACGAGTGTTGCCGGAAGCCTTGAAGTTCAAACGGGCGAACGAAACGCGGTCGTTTAAGGTCATGGTAAAAGGGGCGGTGGCGGCGGAAGGGAATGTTCTTTTGAAGGCTTCGCTCGAGTGGAATGATTCGAAGCATAATGTTAGGATCCCAATTTTAGCATTTAGAAGTTAA 2190 53.11 MLKGFLSFISLIAAVASSTNIPRKAYVVYMGALPKVQSHGVLEEYHHSLLANAVGDEELARKSKIYSYGRSFNGFAAKLLPHEAQKLAKEKGVVSVFQSTTRKLHTTRSWDFLGLSTAASRRNAAAESDMIVGLLDSGIWMGSPSFKDDGYGEIPSKWKGHCVTGHNFTGCNRKVIGARFFNLQEIDATINQSPADEVGHGSHTSSTVAGATVDGASLYGIAGGTARGGVPAARIAMYKVCWNVGCTDADLLAGFDHAIADGVDIISVSIGGGLREFFEDPIAIGSFHAMAKGILTSCSAGNNGPGLTTVENTAPWIMTVAASTIDRDFSTVVKLGNNKKLSGISLNTFSTKKKMYPLISGGSAALPNHPNARWCDGGSLDKGKVEGKILYCLGSLDQEYTVSELGGVGVIANLMNSTEVLAVTPIPATHLSSQDSDIVEAYINATQKPKAVIMKTTTTKTEAPFLAYFSSRGPQFIARDILKPDVAAPGMNILAANTKLATIPTGKHSTFDIMSGTSMACPHVAAAAAYLKTFHPTWSPAAIKSALMTTATPLKIGESQDELGVGAGQINPTKAVNPGLIFDLSRTSYISFLCNKNHYAGTALAILAGDSSFNCSAVTPNTGSDGLNYPSMYVPVDLQATAVSAVFHRIVTHVGSGPSTYKAKVKSPMGLSVRVLPEALKFKRANETRSFKVMVKGAVAAEGNVLLKASLEWNDSKHNVRIPILAFRS 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2240222 2244585 - Carg14523-RA Car06g00403 150139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00403 729 Pfam Fibronectin type-III domain 627 725 IPR041469 -
Car06g00403 729 Pfam Peptidase inhibitor I9 26 105 IPR010259 -
Car06g00403 729 ProSiteProfiles Serine proteases, subtilase domain profile. 109 576 - -
Car06g00403 729 Pfam Subtilase family 128 566 IPR000209 GO:0006508|GO:0008236
Car06g00403 729 ProSitePatterns Serine proteases, subtilase family, serine active site. 516 526 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01067 Car-Chr4:6121382 Car06g00403 Car-Chr6:2240222 0 dispersed
Car06g00403 Car-Chr6:2240222 Car09g00079 Car-Chr9:398345 2.74E-159 dispersed
Car06g00403 Car-Chr6:2240222 Car07g00850 Car-Chr7:4495471 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00403 - - cmo:103486592 990.719