Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00431 ATGTGGGCAAGCGCCGAAGGAGGGCCGCCGGAGGTTACTCTGGAGACTTCCATGGGTTCTTTCACCGTCGAGCTTTACTTCAAACATGCGCCGAGAACATGTAGAAATTTTATTGAACTTTCTCGGCGAGGTTATTACGACAATGTCAAATTTCACCGGATTATTAAGGATTTTATAGTTCAAAGTGGAGATCCCACAGGAACTGGACGGGGTGGGGAATCTATTTATGGTAAGAAGTTTGAGGATGAAATAAAACCAGAGTTGAAGCATACCGGAGCTGGTATTCTATCAATGGCAAATGCTGGTCCTGATACAAATGGAAGCCAATTCTTTATCACTCTTGCTCCTTGCCCATCCCTAGATGGGAAGCACTCCATCTTTGGAAGAGTTTGTAGAGGAATGGAAATAATCAAAAGGCTTGGCAGCGTACAAACTGATAACAATGATAGACCCATCCATGATGTGAAAATACTACGAGCATCAGTTAAAGACTAA 495 43.23 MWASAEGGPPEVTLETSMGSFTVELYFKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFIVQSGDPTGTGRGGESIYGKKFEDEIKPELKHTGAGILSMANAGPDTNGSQFFITLAPCPSLDGKHSIFGRVCRGMEIIKRLGSVQTDNNDRPIHDVKILRASVKD 164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2395804 2399131 - Carg25885-RA Car06g00431 150167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00431 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 25 40 IPR002130 GO:0000413|GO:0003755
Car06g00431 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 51 63 IPR002130 GO:0000413|GO:0003755
Car06g00431 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Car06g00431 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 109 121 IPR002130 GO:0000413|GO:0003755
Car06g00431 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 IPR002130 GO:0000413|GO:0003755
Car06g00431 164 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 1 5 163 - -
Car06g00431 164 PIRSF Peptidylpro_ismrse 3 164 IPR024936 GO:0003755
Car06g00431 164 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 161 IPR002130 GO:0000413|GO:0003755
Car06g00431 164 SUPERFAMILY Cyclophilin-like 11 162 IPR029000 -
Car06g00431 164 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 15 162 IPR002130 GO:0000413|GO:0003755
Car06g00431 164 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 5 163 IPR044666 -
Car06g00431 164 Gene3D - 3 164 IPR029000 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00431 Car14g00298 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00431 Car-Chr6:2395804 Car12g00717 Car-Chr12:6083106 1.01E-52 dispersed
Car01g00438 Car-Chr1:2504719 Car06g00431 Car-Chr6:2395804 5.70E-12 transposed
Car14g01715 Car-Chr14:13599014 Car06g00431 Car-Chr6:2395804 2.96E-06 transposed
Car14g00298 Car-Chr14:1431884 Car06g00431 Car-Chr6:2395804 6.50E-121 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00431 K12733 - csv:101222111 338.961