Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00437 ATGTCCTTAAACCACTTCTCTTCAGACTGCCATCTCCACCACCCCAAATCCTCCGCCTCCGCCGTCGACCACCACCTCATCCACCACCACCGCAAGCACCCCATGTTCGAAAAGCCCTTGACTCCCAGCGACGTTGGCAAGCTCAACCGCCTCGTCATCCCCAAGCAATATGCTGAAAAATATTTCCCACTTTCCCCCGGCGGCGACACGGCGGACAAGGGCTTGCTTCTTAGCTTCGAAGATGAGTCCGGTAAGATGTGGCGCTTCCGTTACTCGTATTGGAATAGTAGCCAGAGCTATGTGCTCACTAAAGGGTGGACCCGCTTTGTCAAAGAGAAGCGCCTTGACGCCGGTGATGTCGTCGTCTTTGAACGCCACCGCCGTATTTTTGTCAAATTTTCACCCTTTTATTTATCCATTAATTACCCAGAAATTAATAGTCCTCTGTTCAGAGTCAAACAGTGTCGGTTGGGAATTCAAAGATACTGCGTCTGTTCGGGGTGGACTTGGAGTGCCAAACCGACATGTCGGAACCCGAACAACCCTCGACGCTCGGTGGCGGATCGGGTCTATCGGGTCAAGATCCAACCCGTCACAGCTTCTACACACACTGACACTATTTCTCATCACATGGATTCCACTTTCCCACAAGATGTGAAGCAGGCGAAATATGAAGGATAG 681 51.4 MSLNHFSSDCHLHHPKSSASAVDHHLIHHHRKHPMFEKPLTPSDVGKLNRLVIPKQYAEKYFPLSPGGDTADKGLLLSFEDESGKMWRFRYSYWNSSQSYVLTKGWTRFVKEKRLDAGDVVVFERHRRIFVKFSPFYLSINYPEINSPLFRVKQCRLGIQRYCVCSGWTWSAKPTCRNPNNPRRSVADRVYRVKIQPVTASTHTDTISHHMDSTFPQDVKQAKYEG 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2421078 2423022 + Carg25891-RA Car06g00437 150173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00437 226 Pfam B3 DNA binding domain 36 127 IPR003340 GO:0003677
Car06g00437 226 ProSiteProfiles B3 DNA-binding domain profile. 36 144 IPR003340 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00437 Car-Chr6:2421078 Car15g01205 Car-Chr15:9362991 5.31E-44 dispersed
Car14g00304 Car-Chr14:1460244 Car06g00437 Car-Chr6:2421078 1.03E-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3667 PF02362 B3 6.80E-29 CL0405 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00437 - - mcha:111014360 193.741