Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00463 ATGGCGACGTACCTTCATGCCAATTCTGAGTTTCAATCTGCTGCTGATGCTGGCCTTCAAACCCTTGTCTTAATGAATCCCGGCTATGTTCAATTCTCCGACACCCCACCGCCGCCTTCATCGCCGCCTCCTTCACACCCTAATCTTGTTTTCTTCAATTCTGCTACGCCTGCTAATGCCTACTCTGCACAGACTCTGCCTCACCCGCCTTCTCATGCTCAACAGTTTGTCGGCATCCCACTACCGTCGACAACAACCGCTTCTCCGACGTCTCAAGACCATAATTTGTATTCCTTCAATACCCACCATGATATCTCCGCCTTACATGGCTTCGTTCCTCGTGTTCAGTATGATATTTGGAAACCAATTAACCCATCCACGACGGCGCGTGAGACTTCACGGGCACAACAGGGTTTGTCTTTGAGTCTGTCTTCACAGCAGGGTTTTGGGTCGAGAGAGATTCAATCGCAAACCCATCAGGCGGTTTCCGGCGAGGAGAACGTTCGGATCTCCGGTGGATCGTCTTCCTCTGCTTCCGGTATCACCAATGGGGCGGCTGGAATTCAGGGCGTTTTAATTAGTTCTAAGTATCTCAAGGCTGCTGTAGAACTTCTAGATGAGGTTGTTAATGTCACCCAAAACGGGATTAAGAACGAATCGTCTCCTAAAAAGGCTGCCGGAAATCAAAACAAGATGAATGGAGATGCATCCGCCGCCGCCACAACTGCCGATGGTTCTTTCGAAGGAGAAGGCGACGGGAAACGCGTCGCCGATTTAACGACCGCCGAGAGACAAGAAATTCAAATGAAGAAAGAAAAGCTTATCAGTATGCTCGATGAGGTAGAGCAGAGGTACAGACACTACCACCACCAAATGAAGATAGTGATATCCACATTTGAAAAGGCGGCCGGAGCTGGGTCGGCAAGAACCTACACCGCGCTGGCACTTCAGACAATTTCAAAGCAATTCCGGTGCTTAAAAGACGCAATCACCGGCCAAATCAAAGCGGCGAACAAGAGTTTAGGAGAAGAAGAATACAACGGAAGAAAAATGGAAGGTTCCCGGTTGAAATTCGTCGATAACCATCTCCGGCAACAGCGAGCTCTGCAACAATTGGGTATGATCCAACACAATGCGTGGAGACCCCAACGAGGCTTACCGGAGCGATCCGTTTCGATTCTTCGCGCTTGGCTGTTCGAACACTTTCTCCACCCTTACCCTAAAGATTCAGACAAACACATGCTCGCTAAGCAAACAGGGCTCACCAGAGGCCAGGTTTCGAATTGGTTCATAAATGCGAGAGTTCGACTGTGGAAGCCAATGGTGGAAGAGATGTATTTGGAGGAAGTCAAGGAACAAGAACAGAACGGCGGTGGCGGATTGGCACCGTCGACGGCTGCGGAAAAAAGCAACGACGATTCAGATTCAAAAAGCCCAAATTCAAAACAAGAAAACTCTCCAAACCAAAACGTTCATCCTTCAGTCTCAATCTCAACGTCCTCCGATGGAAATGTTCGAAACCCATCTGGGTTTACCCTCATCGGAACTTCATCGGAGCTCGACGGAATCACTCAACGAAGCCCCAAGAAACAGAGAGGCACCGAAATCCTCTATTCCTCAAACAACAACAACAACAACGTCCAGTTCATAAACATGGACATCAAACTCCGAGAAGAAGAACAACAAAATCAAAATCTCCATCATCTTCCAATGAAATTCGACGAGGAAAGACAAAACAGAGATGGGTATTCATTTCTAGGCCAACCCCATTTCAACATGGCCGGATTCGGGCAATACCCAATCGGAGAAATCAGCCGATTCGACGCCGATCAGTTCACTCCAAGATTCTCCGGCAACAATGGCGTCTCATTGAGTCTAGGCCTTCCCCATGGCGAAAATCTCTCCGTAAACGCAGCCACCCACCAAGCCTTTCTCCCAAATCAAAGCATCCATTTAGGAAGAAGAACAGAAATGGGAAAACCCACTGATTTTTCCGCCATTAACGCCTCAACACCTCACTCCTCCACTGCATTTGAAACCATCAACATCCAAAATGGCAAGAGGTTCGCAGCTCAGTTACTACCGGACTTCGTGGCCTGA 2100 48.52 MATYLHANSEFQSAADAGLQTLVLMNPGYVQFSDTPPPPSSPPPSHPNLVFFNSATPANAYSAQTLPHPPSHAQQFVGIPLPSTTTASPTSQDHNLYSFNTHHDISALHGFVPRVQYDIWKPINPSTTARETSRAQQGLSLSLSSQQGFGSREIQSQTHQAVSGEENVRISGGSSSSASGITNGAAGIQGVLISSKYLKAAVELLDEVVNVTQNGIKNESSPKKAAGNQNKMNGDASAAATTADGSFEGEGDGKRVADLTTAERQEIQMKKEKLISMLDEVEQRYRHYHHQMKIVISTFEKAAGAGSARTYTALALQTISKQFRCLKDAITGQIKAANKSLGEEEYNGRKMEGSRLKFVDNHLRQQRALQQLGMIQHNAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKHMLAKQTGLTRGQVSNWFINARVRLWKPMVEEMYLEEVKEQEQNGGGGLAPSTAAEKSNDDSDSKSPNSKQENSPNQNVHPSVSISTSSDGNVRNPSGFTLIGTSSELDGITQRSPKKQRGTEILYSSNNNNNNVQFINMDIKLREEEQQNQNLHHLPMKFDEERQNRDGYSFLGQPHFNMAGFGQYPIGEISRFDADQFTPRFSGNNGVSLSLGLPHGENLSVNAATHQAFLPNQSIHLGRRTEMGKPTDFSAINASTPHSSTAFETINIQNGKRFAAQLLPDFVA 699
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2556492 2559743 + Carg16215-RA Car06g00463 150199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00463 699 Coils Coil 264 284 - -
Car06g00463 699 MobiDBLite consensus disorder prediction 480 540 - -
Car06g00463 699 MobiDBLite consensus disorder prediction 450 540 - -
Car06g00463 699 ProSiteProfiles 'Homeobox' domain profile. 377 440 IPR001356 GO:0003677
Car06g00463 699 Pfam Homeobox KN domain 397 436 IPR008422 GO:0003677|GO:0006355
Car06g00463 699 MobiDBLite consensus disorder prediction 217 240 - -
Car06g00463 699 MobiDBLite consensus disorder prediction 156 180 - -
Car06g00463 699 MobiDBLite consensus disorder prediction 217 253 - -
Car06g00463 699 Pfam Associated with HOX 191 331 IPR006563 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00463 Car14g00330 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00086 Car-Chr5:436930 Car06g00463 Car-Chr6:2556492 3.49E-47 dispersed
Car06g00463 Car-Chr6:2556492 Car20g00709 Car-Chr20:4092444 1.08E-95 dispersed
Car14g00330 Car-Chr14:1571650 Car06g00463 Car-Chr6:2556492 0 wgd
Car02g01093 Car-Chr2:7586077 Car06g00463 Car-Chr6:2556492 1.11E-169 wgd
Car20g00129 Car-Chr20:717400 Car06g00463 Car-Chr6:2556492 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3670 PF07526 POX 1.40E-46 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00463 - - csv:101208201 1061.21