Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00464 ATGGAAGAAATCGAAGTCCCCAACTACTTCCTCTGCCCAATCTCCCTCCAAATCATGAAAGACCCCGTCACCGTCCCCTCCGGCATCACCTACGACCGCCCCTCCATCGAAACCTGGCTCTTCTCCACCAAAAACGCCTCCTGCCCCATCACCAAGCTCCCCATCCCCGCCGACTCCGATTCCCTCACCCCCAACCACACCCTCCGCCGCTTAATCCAAGCCTGGTGCACTCTCCACTCGCATCATGGCATCGAACGCTTCCCCACTCCCAAGCCCCCCATCAACAAGCCACAAATCCACAAACTCATCTCCTCCTCTTCCTCTACTCCCTCCTCCCTTCTCTCCTGCATTCGCCGCCTCCGTTCTCTCGCCGCGGAATCCGAATCCAACCGCCGATGCATCGAATCCGCCGGCGCCCCTGAGTTTCTAGCCTCTGTTATCATCAATTCCATCTCCGACAACGACAACGAAACCGCTCCGATTTCCTGCCATGAAGCGCTTTCCACTCTCCATAATCTCCGCCTCTCCGATTCCAAGTTGAAGAGCTTGACCGTAAACGCCGAGCTTTTTGATTCGTTGACGAAGGTCATGGAACAGGGGACGTACGAGTCACGAGCGTACGCGGCGTTGCTTTTGAAATCATTACTGGAAGTGGCCGACCCAATGGAGCTGGCATTCCTAAAATCCGAACTGTTTGTGGAAATTGTTGGGATCTTGAAGGATCAGACATCGCAGCAGAGTTTGAAAGCGGCATTGGGGATTTTGATTACGGCCTGCACATGGGGGAGGAACAAAGTGAAGGCGGTTGAGGCAGGTGGGGTTGTGGCTTTGGTCGAGATATTACTCTCGGGACCGGAGAGGAGGGTGTCCGAGATGGCGTTGACGGCGATGGATTTGCTATGTGGGTGTGCAGAAGGGCGAGCGGCGCTTCTGGGTCACGGCGGAGGGATGGCAGTGGTTTCGAAGAAGATCTTGAGAGTGTCGCAAGTGGGGAGTGAGAGGGCGGTTAGGATTCTGTTTTCGGTGGCGAAATATTCAGGGTGTCCGGCGGTGTTGACGGAAATGGCGCAGTTGGGGATCGTGGCGAAGCTTTGCCTGGTTCTGCAAGTTGAAAGTGGAAGCAAGACGAAGGAGAAGGCTAAAGAAATTTTGAAGATGCATGCTCGAGTTTGGAGGAATTCGGCTTGTATTCCTTCCAAATTGGCTTCTTCTTATCCTGCAAATTAA 1227 54.2 MEEIEVPNYFLCPISLQIMKDPVTVPSGITYDRPSIETWLFSTKNASCPITKLPIPADSDSLTPNHTLRRLIQAWCTLHSHHGIERFPTPKPPINKPQIHKLISSSSSTPSSLLSCIRRLRSLAAESESNRRCIESAGAPEFLASVIINSISDNDNETAPISCHEALSTLHNLRLSDSKLKSLTVNAELFDSLTKVMEQGTYESRAYAALLLKSLLEVADPMELAFLKSELFVEIVGILKDQTSQQSLKAALGILITACTWGRNKVKAVEAGGVVALVEILLSGPERRVSEMALTAMDLLCGCAEGRAALLGHGGGMAVVSKKILRVSQVGSERAVRILFSVAKYSGCPAVLTEMAQLGIVAKLCLVLQVESGSKTKEKAKEILKMHARVWRNSACIPSKLASSYPAN 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2564146 2565372 + Carg16216-RA Car06g00464 150200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00464 408 ProSiteProfiles U-box domain profile. 5 82 IPR003613 GO:0004842|GO:0016567
Car06g00464 408 Pfam U-box domain 6 80 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00221 Car-Chr3:3507165 Car06g00464 Car-Chr6:2564146 8.76E-151 dispersed
Car04g00082 Car-Chr4:435930 Car06g00464 Car-Chr6:2564146 2.57E-57 dispersed
Car06g00464 Car-Chr6:2564146 Car07g01144 Car-Chr7:6877701 7.94E-131 dispersed
Car20g00128 Car-Chr20:714388 Car06g00464 Car-Chr6:2564146 1.37E-143 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00464 - - csv:101208445 567.77