Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00521 ATGGGAAGGATGGGAGGTCGGCAAAGGACTTACAGCGCCAATTCCACCGATTATAAGCTTCTTGAAGAGATTGGTTATGGTGCTAGTGCCACGGTTTTTCGAGCGATCTATACTCCGTCCAATGAAGTTGTTGCCATTAAGTGTTTGGATCTTGATCGCTGTAATAGTAATCTAGATGATATACGTAGGGAGGCTCAAACAATGAGTTTGATAGATCATCCAAACCTCGTAAGGGCTTATTGTTCATTTGTTGTTGACCGAAACCTTTGGGTTGTCATGCCATTCATGGCAGAGGGTTCTTGTTTGCACCTAATTAAGACAGCATACTCAGATGGCTTTGAAGAGGTTGCTATTGGTTCTGTCCTGAAAGAAACTCTTAAAGCCTTGGAGTACCTTCATCGACAAGGACACATACATCGGGATGTGAAGGCTGGAAATATACTACTCGATGGTAATGGGGCTGTGAAGCTTGCTGATTTTGGTGTTTCAGCTTGCATGTTTGATACAGGTGATAGACAGCGCTCCAGAAATACCTTTGTGGGAACCCCATGCTGGATGGCACCCGAGGTATTGCAACCAGGAACGGGATATAATTCCAAGGCCGATATTTGGTCTTTTGGTATTACAGCATTGGAGTTGGCTCATGGTCATGCACCATTTTCAAAATATCCTCCAATGAAGGTGCTTCTTATGACCATACAAAATGCTCCTCCTGGGCTGGATTATGATAGGGATAAAAAGTTCTCTAAGTCTTTTAAAGAAATGGTTGCAATGTGCCTGGTGAAAGATCAATCCAAGAGGCCAACAGCTGAGAAACTTTTAAAGCACTCCTTTTTCAAGAATGCTAAGCCTCCAGAGCTTTCTTTGAAGAAATTATTTGCTGACTTGCCTCCTCTTTCACTTCGTGTGAAGGACCTGCTGCTTAAAGATGCTGCCCAGCTAGCCTTAAAGAAAATGCCTTCAGCAGAGCAAGAAGCATTATCACAGAGTGAGTACCAGCGAGGAGTTAGCGCATGGAAATTTGATGTTGAGGATTTGAAAGCCCAAGCTTCCCTGGTGAATGATGATATGGAAGAGATGATGGACGAGGAGGAGAATATAAATACTTGTCGTGTTAAGGATGCCTTTTGTTCTCAATCTAGTTTGAGGAATTTCAGTTCATGTAATGAATCATCTCAGGATGAACATGGAGTAGGGGCAAGTGGTCAGGGGTTGCCAAAAGCGGAGTGCTTGAACAAAAAGGGAAACTTTATGGAAGGTGATATGCTGAAAGCTGGGTTCCAAGAAACAACTGGATGGAAGAGAAATGGAACTAGCAGTGAAGCAGAAGCTTCTACATCTGGCCAAGACAGTGTACAAGGCAAAACCAAAACCCAAATGCCAAAAGGTCGTCAAACTCAAAGTGGTCCACTTCTACCTGGTACTGTGCTTAGTCATTCTTTATCAGAAAGAGTGCGAGGATCTGATAGGTTTGAATCTGAAATTCAACCATCTACTGAAAAAAATCGTCGAGAAGCACGGCAAGCTCCAAGCTTCAGTGGTCCACTAATGCTGCCAAACCGTGCCTCAGCAAACAGCCTATCAGCTCCCATAAAACCTTCTGGAGGGTATAGAGATTCAATGGATGACAAATCAAAAGCTAATCTTGTGCAAATTAAGGGGCGTTTTTCAGTGACGTCAGAGAACCTAGATCTCGTAAAGGATATTCCATTGAGCACGGTTTCACGACGGTCTGCACAGAACTCACCTCTACGAAAGTCGGCTAGTGTTGGTGATTGGATATTTGATTCCAAGCAGTCTGTCAGCCAACCCCCCAAGGAGGCTTGCAACATCAACATGCCCACATCAATTCTTATGCCTCATCTTCAGAATCTTTTCCATCAGACCTCAATTCAACAGGATCTTATAGTGAACTTATTGAATAGCTTACAAACAGCAGACGTGGTTGATGCTACTCAAAATGGAAAGTTGCCTCCATTGCCTCGAAGTTTGGAGAATAATGGAAGTGCCGAAACAGCAGCGGTTGAGAGAGAGCGTTTACTGATGCGTAAAGTCTCTGAACTTCAAGCTAGAATGACGCATTTGACTTATGAGTTGACTTCTGAAAAGTTGAAATACATACAATTACAAGAGCAGTTCAACTCAGCATCTGGCCAGGAAGAAAACGAGATCAAGAGGGAAGAGAACGTCTGA 2193 43.41 MGRMGGRQRTYSANSTDYKLLEEIGYGASATVFRAIYTPSNEVVAIKCLDLDRCNSNLDDIRREAQTMSLIDHPNLVRAYCSFVVDRNLWVVMPFMAEGSCLHLIKTAYSDGFEEVAIGSVLKETLKALEYLHRQGHIHRDVKAGNILLDGNGAVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQSKRPTAEKLLKHSFFKNAKPPELSLKKLFADLPPLSLRVKDLLLKDAAQLALKKMPSAEQEALSQSEYQRGVSAWKFDVEDLKAQASLVNDDMEEMMDEEENINTCRVKDAFCSQSSLRNFSSCNESSQDEHGVGASGQGLPKAECLNKKGNFMEGDMLKAGFQETTGWKRNGTSSEAEASTSGQDSVQGKTKTQMPKGRQTQSGPLLPGTVLSHSLSERVRGSDRFESEIQPSTEKNRREARQAPSFSGPLMLPNRASANSLSAPIKPSGGYRDSMDDKSKANLVQIKGRFSVTSENLDLVKDIPLSTVSRRSAQNSPLRKSASVGDWIFDSKQSVSQPPKEACNINMPTSILMPHLQNLFHQTSIQQDLIVNLLNSLQTADVVDATQNGKLPPLPRSLENNGSAETAAVERERLLMRKVSELQARMTHLTYELTSEKLKYIQLQEQFNSASGQEENEIKREENV 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2927950 2940538 + Carg16273-RA Car06g00521 150257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00521 730 Pfam Protein kinase domain 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00521 730 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Car06g00521 730 MobiDBLite consensus disorder prediction 432 542 - -
Car06g00521 730 Coils Coil 343 363 - -
Car06g00521 730 ProSiteProfiles Protein kinase domain profile. 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00521 730 MobiDBLite consensus disorder prediction 432 475 - -
Car06g00521 730 MobiDBLite consensus disorder prediction 483 507 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00521 Car16g01156 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01040 Car-Chr1:9848189 Car06g00521 Car-Chr6:2927950 3.47E-70 dispersed
Car06g00521 Car-Chr6:2927950 Car15g00325 Car-Chr15:1742580 1.53E-169 dispersed
Car16g01156 Car-Chr16:9849413 Car06g00521 Car-Chr6:2927950 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88935 PF00069 Pkinase 6.90E-61 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00521 - - csv:101213683 1332.01