Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00576 ATGGCCATTCCTATATCAGCTAACATTTCATGCCAATCTGTTCTTCACCTCACTATCGGCCTTCCTACCGTCTTTCGTCACTCGATCATCTGGTGCGTCGATTTCGACCTAAAGGTGCGCTTTGCGACAACGCTTATACATTCGGTTATAAAGGATATTGCCCAGAAACAAGCTATGGAAGCTGACTACCATACCGCCACGACTCAGATTGGACCTTTGTCCTTGCCGAGTTCCGATGATATCACTCATTTTGAAGTGGTCCATTTGCCACACATTTTGAAGAGGCAAAAAGATTGGGAGACATCTGTAAGTGTGACAGATTTCGACTGGAAACAGATTGCCGAACCCGTTATGCAACTGTACACCGAGACGACGGATGGTTCTACAATCGAAACTAAAGAGAGCGTTCTTGTTTGGAACTACCTTTACGCGGATCCTGATTTCGGCTCGTGCCAGGCTAAGGAACTTTTAGATCACCTTGAAAGTGTTCTTGCTAATGAGCCAGTTTCTGTCAAGAGTGGCCAACACATTGTAGAAGTCAAACCTCAGGGTGTAAACAAGGGTATTGTAGCAGAATATCTCTTGCAAACAATGAGGGAGAAGGGAATGCTTCCCGATTTCGTTCTATGCATCGGAGACGATAGGTCGGACGAGGATATGTTCGAGGTGATAACGAGTGCAAAACCCACCCTTCCTCCCAATGCTGAAGTGTTCGGTTGCACGGTCGGGCAGAAACCGAGCAAGGCTAAGTATTACTTGGAAGACACACACGAAATCTTGAGAATGTTACAAGGTCTCACCCATGCGTCCGAGCATGCCGCTCGAGCCACCGCACAGACGACGCCTCATAGAGTGATTATTCTTTACGGCGACCCCGAGAGATGCGGCGGCGCGTATCTGAATGTTGTCCAATCCTCCATTCCGGCCGGCGGCTGCACGGAACTTTGCGCCAAAACTAACACCGTCTCTGTGATCCGAATATCTCCGGTCTGTGCGTTTGCGAACTTGATGGATTCAAGTATTGCTATTGGCATCGTAATTCTCAGTATCAGCTTGATTTTGAGTCGTGTCCTTTATGTTTTATATTGGAGTGGTAGACCCCTTCCAAACAAAAGCTTGGGATCTGTCAGTACCCTCATTGTCTTAGGCTCAGGGGGTCACACGGCCGAAATGCTCAATGTGTTGTCTGTGCTGCAGAAAGACTTGTTTTCTCCAAGATTCTACATTGCTGCTGCTGCTACCGATTACATGAGTCTTCAAAAAGCTCGCACATATGAACATCAACTGCCTCATAAGGTACGTTATCAGGGTCTTCAAACTTCTCTTATTTTTCTGAATAAGGAAACGAGGGAGGGGATAGTATGGCCTATGGATTCTCTGCAATGGCCATGGTACAATTGTATCCCATTATGCGCAATTGCATTCATATTCAAGGTTGTGGGGATTAGATGGTCATCAATTTTTTATGTGGAAAGCATTGCAAGAGTGAAGAGATCATCATTGAGTGGGTACATTTTATACAAGTTACACATGGCTGATCAGTTCTTTGTGCAATGGCCACAACTACACACAAAATATCCCCACGCTCACTACGTTGGTTGTCTCGTGTAG 1611 46.06 MAIPISANISCQSVLHLTIGLPTVFRHSIIWCVDFDLKVRFATTLIHSVIKDIAQKQAMEADYHTATTQIGPLSLPSSDDITHFEVVHLPHILKRQKDWETSVSVTDFDWKQIAEPVMQLYTETTDGSTIETKESVLVWNYLYADPDFGSCQAKELLDHLESVLANEPVSVKSGQHIVEVKPQGVNKGIVAEYLLQTMREKGMLPDFVLCIGDDRSDEDMFEVITSAKPTLPPNAEVFGCTVGQKPSKAKYYLEDTHEILRMLQGLTHASEHAARATAQTTPHRVIILYGDPERCGGAYLNVVQSSIPAGGCTELCAKTNTVSVIRISPVCAFANLMDSSIAIGIVILSISLILSRVLYVLYWSGRPLPNKSLGSVSTLIVLGSGGHTAEMLNVLSVLQKDLFSPRFYIAAAATDYMSLQKARTYEHQLPHKVRYQGLQTSLIFLNKETREGIVWPMDSLQWPWYNCIPLCAIAFIFKVVGIRWSSIFYVESIARVKRSSLSGYILYKLHMADQFFVQWPQLHTKYPHAHYVGCLV 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3308313 3316395 - Carg23387-RA Car06g00576 150312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00576 536 Pfam Trehalose-phosphatase 95 256 IPR003337 GO:0003824|GO:0005992
Car06g00576 536 Pfam Oligosaccharide biosynthesis protein Alg14 like 466 535 IPR013969 GO:0006488
Car06g00576 536 Pfam Oligosaccharide biosynthesis protein Alg14 like 379 434 IPR013969 GO:0006488
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00576 Car-Chr6:3308313 Car16g01106 Car-Chr16:9513585 9.31E-78 dispersed
Car06g00576 Car-Chr6:3308313 Car19g00792 Car-Chr19:8586811 8.72E-79 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00576 K16055 - csv:101207192 355.525