Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car06g00585 | ATGGCGGAATTGGACTTAGGAACTCGATATTTCTCCGCCGCCGACCACGACGACGACGACGACGATCCCCACCAATCCCACGGCGGCGCTGACGATGTCCTTGGCCGCCGCCCTCGCGGCCGACCACCAGGTTCAAAAAATAAGCCGAAGCCGCCGGTTATCATCACCCGCGAGAGCGCCAACACGCTACGTGTCCACATCTTAGAGGTCAACAGCGGCTGTGACATATTTGATTGCATCGCCGCCTACGCGCGTCGGCGACAGCGTGGGATCTGTATTTTGAGCGGTAGTGGCAACGTCAGTAACGTCGGAATCCGCCAACCAGCAGCGGCCGGAGCCGTACTGACTCTTCATGGGAGATTCGAGATTTTGTCGTTATCTGGATCGTTTCTTCCGCCGCCTGCTCCGGCTAGCGCCACTAGTTTGACTATATTTTTGGCCGGAGGGCAGGGACAGGTGGTCGGCGGGACGGTGGCTGGAGAATTAACAGCCGCAGGACCAGTGATTTTGATTGTAGCTTCGTTTAGTAATGTGGCGTATGAGAGATTACCACTGGATGAGGAAGATCAGCAGCAGCAAGTCCCCGTCGCAAGCGGCGGAGTTGGCGGCGGCGGCGGCGGCGACAACCCATTTCAAGACGCATCAAATTCAGGAGTTCCATTTTTGAATTATCCACTTCATATGCAAAATATTCAGCTTCCACCTTTCTGA | 711 | 55.7 | MAELDLGTRYFSAADHDDDDDDPHQSHGGADDVLGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIVASFSNVAYERLPLDEEDQQQQVPVASGGVGGGGGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF | 236 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 3358808 | 3359518 | - | Carg23378-RA | Car06g00585 | 150321 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car06g00585 | 236 | ProSiteProfiles | PPC domain profile profile. | 60 | 197 | IPR005175 | - | |
| Car06g00585 | 236 | MobiDBLite | consensus disorder prediction | 188 | 214 | - | - | |
| Car06g00585 | 236 | MobiDBLite | consensus disorder prediction | 1 | 54 | - | - | |
| Car06g00585 | 236 | MobiDBLite | consensus disorder prediction | 10 | 39 | - | - | |
| Car06g00585 | 236 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 64 | 177 | IPR005175 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car06g00585 | Car16g01091 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car06g00585 | Car-Chr6:3358808 | Car14g01831 | Car-Chr14:14239553 | 9.23E-86 | dispersed | |
| Car16g01091 | Car-Chr16:9371877 | Car06g00585 | Car-Chr6:3358808 | 4.64E-109 | wgd | |
| Car19g00198 | Car-Chr19:1863338 | Car06g00585 | Car-Chr6:3358808 | 1.51E-76 | wgd | |
| Car02g01367 | Car-Chr2:9050395 | Car06g00585 | Car-Chr6:3358808 | 3.21E-79 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car06g00585 | - | - | cmax:111498487 | 362.459 |