Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00589 ATGCAAGAAGCTTCAAGAAAGAAGGTTTCAGATCAATCTCACAGGTTCTATGGACAACCACAGCAAGAACCTGGATCCTATTACTGGCCTCCTATCAACCAAAATCACTTACCATCTGAGGCTTTCAACCCATATTGCAACCTTGAGTCGTCCTTGGGAACTAGCAGTTACCCACCTCAAAATTCTTCTTCTACTGTTAGCTTCACATCTAATGGAAGCCCTTCACACCAAGAGTGCCATTCATACCCGTTAGAACCTTATTATTCTCCTGACAACAACCGTGGCTCGCCTGTCAGTAGATCTTGCTTAACAGATGATGCTGATGATGACTTGAGGCACAAGATCAGGGAATTGGAGATTGCAATCCTTGGACCTGATTCAGAGATGTTTGATGTCTATTCTGTCTATAATCCAGTCAATCCTGTGTTATCTGAGCAAGAAGCAGGGTGGAAAGATGTGGCTGAGATAATCTCTAGAAGGGATTTGAAAGAGATGCTTTGTGCTTGTGCTCGAGCAATAGGAGAAAATGATATGTTGGCTGGAGAATGGTTGATATCTGAGTTACGTGGAATGGTCTCGGTTTCGGGTGAGCCAATCCAACGTTTAGGAGCTTACTTGTTAGAGGCACTTGTTGCAAGGACAGCTTCTTCAGGTAGTACTATCTACAAGGCACTAAGATGTAAAGAGCCTATAGGCTCTGAATTGCTCTCATACATGAACATTCTCTACGAAGTTTGCCCTTATTTCAAGTTCGGGTACCTATCAGCAAATGGGGCAATTGCTGAAGCCATAAAAGGTGAAAATAGAGTTCACATAATTGATTTCCAGATAGGTCAGGGAAATCAGTGGATGACATTGATGCAAGCTCTTGCGAATCGGCCTGGAGGGCCCCCAAAGATTACTATCACAGGGATAGATGATTCTACTTCAGCATTTTCTCGAGGAGGGGGCGTCGAAATTGTAGCGAAAAGGTTGTCGAACTTGGCAGAGTCATTGATGGTACCCTTTGAGTTCCATGGAATTGCAGGCTCTGCTTCCGAAATTCAACTAGAAGATCTAAAAGTTCAACCAGGTGAGGCCATTGCTGTGAATTTTGCCTTGGTGCTGCACCATATGACAGATGAAAGTGTCGGCAGTCCGAATCATCGGGATCGAATCCTGCGACTCGTCAAGAGCTTATCTCCAAAAGTTGTGACCGTTGTCGAGCAAGAGTCGAACAACAATACAGCTCCCTTTTTTCCCCGTTTTCTCCAAACATTGAACTATTATACTGCCATTTTCGAGTCCATAGATATGACTCTTCCAAGAGAGCACAAGGAGCGGATCAATGTCGAGCAGCACTGTTTAGCTCGGGACATCGTTAATATAGTGGCATGTGAGGGAGCCGAAAGAGTCGAACGTCATGAACTTCTTGGAAAGTGGAGATCAAGGTTCCTCATGGCAGGGTTTGAGCCACACCCTTTAAGCCCTTTTGTCAACGCTACAATTGAAGCACTGCTAAAGAACTACTGTGACAAGTACACGCTAGAAGAAAGGGATGGAGCCCTATATCTTGGCTGGTTGAATCAAAATCTGGTTACCTCTAGTGCTTGGATATGA 1599 44.47 MQEASRKKVSDQSHRFYGQPQQEPGSYYWPPINQNHLPSEAFNPYCNLESSLGTSSYPPQNSSSTVSFTSNGSPSHQECHSYPLEPYYSPDNNRGSPVSRSCLTDDADDDLRHKIRELEIAILGPDSEMFDVYSVYNPVNPVLSEQEAGWKDVAEIISRRDLKEMLCACARAIGENDMLAGEWLISELRGMVSVSGEPIQRLGAYLLEALVARTASSGSTIYKALRCKEPIGSELLSYMNILYEVCPYFKFGYLSANGAIAEAIKGENRVHIIDFQIGQGNQWMTLMQALANRPGGPPKITITGIDDSTSAFSRGGGVEIVAKRLSNLAESLMVPFEFHGIAGSASEIQLEDLKVQPGEAIAVNFALVLHHMTDESVGSPNHRDRILRLVKSLSPKVVTVVEQESNNNTAPFFPRFLQTLNYYTAIFESIDMTLPREHKERINVEQHCLARDIVNIVACEGAERVERHELLGKWRSRFLMAGFEPHPLSPFVNATIEALLKNYCDKYTLEERDGALYLGWLNQNLVTSSAWI 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3394239 3395837 - Carg23559-RA Car06g00589 150325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00589 532 ProSiteProfiles GRAS family profile. 153 532 IPR005202 -
Car06g00589 532 MobiDBLite consensus disorder prediction 52 100 - -
Car06g00589 532 Pfam GRAS domain family 163 531 IPR005202 -
Car06g00589 532 MobiDBLite consensus disorder prediction 52 78 - -
Car06g00589 532 MobiDBLite consensus disorder prediction 1 33 - -
Car06g00589 532 MobiDBLite consensus disorder prediction 14 33 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00589 Car16g00908 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00589 Car-Chr6:3394239 Car20g00575 Car-Chr20:3226120 0 dispersed
Car16g00908 Car-Chr16:7434890 Car06g00589 Car-Chr6:3394239 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3684 PF03514 GRAS 8.00E-131 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00589 - - csv:101220072 906.36