Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00633 ATGGCCTCTACCTCCTCCAACAAGCATCATCACTACAAGGGAATCCGCTGCCGGAGCGGGAAATGGGTGTCGGAGATTCGAGAGCCCCGTAAGACGACTCGAATATGGCTCGGTACTTACCCTACTCCGGAGATGGCTGCTGCTGCCTACGACGTGGCTGCGCTCGCTCTAAAGGGTTGCAATGCTGTTCTCAACTTCCCCGACTCAATTGGGTCGTACCCGGTTCCAACTTCCATGTCCCCGGCTGATATTCGTGTCGCTGCTGCTACTGCTGCCGCTGCATCTAAAAGGATTGACCATGGAGAAGGAAGTTACAATAATCACCACCAATCTCCACCAACTGACGAGTTCGTCGATGAAGAGGCGCTTTTTGGAATGCCGAATCTACTCGTTGACATGGCGGAGGGAATGCTGTTGTCGCCGCCACGAATTAGCTCATCGCCGTCTCGACATGAGTATTACTCGTGGAACTCGAGTGGAGATGGGAATCTATGGAGCTACTATTAG 507 53.06 MASTSSNKHHHYKGIRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGCNAVLNFPDSIGSYPVPTSMSPADIRVAAATAAAASKRIDHGEGSYNNHHQSPPTDEFVDEEALFGMPNLLVDMAEGMLLSPPRISSSPSRHEYYSWNSSGDGNLWSYY 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3705144 3705650 + Carg21649-RA Car06g00633 150369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00633 168 ProSiteProfiles AP2/ERF domain profile. 11 67 IPR001471 GO:0003700|GO:0006355
Car06g00633 168 Pfam AP2 domain 11 59 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00633 Car-Chr6:3705144 Car15g01085 Car-Chr15:8516066 1.74E-34 dispersed
Car16g00962 Car-Chr16:8019931 Car06g00633 Car-Chr6:3705144 2.77E-74 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3687 PF00847 AP2 5.40E-11 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00633 - - csv:101202953 276.944