Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00637 ATGGCCTCTCATCATTATGAACATCATCATCATCATCAAGAAGAAGAAACCACCTCCTCTTCAAATAATTCCCTCCAAATGCGTCAATTACTCATCCGTTGTGCTCATTTCATTTCTCAATCTGATTTCCTCTCAGCTCATCGCCTTCTCTCAATTCTCTCCTCAAATTCCTCTCCTTATGGTGATGCCACCGAACGATTGCTTCATTATTTCACCACTTCTCTCTCCCATCGCATCCCTTCTTCAAATTCCTCTTCTGTTCTTCCTCTTCCTAGTTTGAGTTCAATTGATGATGAACAACAAAAATTGACTCAATCTTGTTATTTGTCATTGAATCAAATCACACCCTTTATAAGATTCACCCATTTGACTGCAAATCAAGCCATTTTGGAAGCTATTGTGGAAGGAGGGATTCATGTTGTGGATTTTGATATCATGCATGGTGTTCAATGGCCGCCTCTCATGCAAGCTTTGGCCGAGCGTTTTCCTTCTCCTATGTTGAGGATTTCCGCCATTGGTCGTGACCTTAACTTTCTTCATAAGACCGGTGACCGTCTTTCTAAATTCGCTCACTCTCTCGGCTTGAGATTTCAATTTCATCCGCTCCTTCTTCTTAATGACCACGATCATCACCGCCTTATCCCCGCCGCTCTTACGCTCTTCCCCGATGAAGCTCTCGCCTTTAATTGCGTTCTCTACTTGCACAAGCTCGTAAAGGAGGATCTTCGAGTGTTGCTACATAAAATCAAGGCATTGAACCCTAAAGTGGTGACCATAGCTGAAAAGGAAGCGAATTTCAACCACCCTTTATTCATGCAAAGGTTTCTAGAGGCATTGAATCATTATTCTCTAATATTTGACTCATTGGAAGCAACTTTGCCTCCAAATAGTAGGGAGAGGCTAGCAGTGGAGCAAGTTTGGTTTGGAAGGGAAATAGACGACGTCGTTTCAAGAGAAGGGAACAAGAGAAAGCAGCGTTATGAGAGGTATGAATCGTGGGAGACAATGCTTAAAAGTTTGGGGTTTTCTAACATTCCTTTGAGCCCTTTTGCTCTCTCACAAGCTAAACTCCTTCTAAGGCTTCATTATCCATCTGAAGGTTACCATCTTCAAATCCTTCATGATTCCCTTTTTCTTGGTTGGCAAAATAGACCACTTTTTTCAGTCTCTTCATGGCATTGA 1182 42.13 MASHHYEHHHHHQEEETTSSSNNSLQMRQLLIRCAHFISQSDFLSAHRLLSILSSNSSPYGDATERLLHYFTTSLSHRIPSSNSSSVLPLPSLSSIDDEQQKLTQSCYLSLNQITPFIRFTHLTANQAILEAIVEGGIHVVDFDIMHGVQWPPLMQALAERFPSPMLRISAIGRDLNFLHKTGDRLSKFAHSLGLRFQFHPLLLLNDHDHHRLIPAALTLFPDEALAFNCVLYLHKLVKEDLRVLLHKIKALNPKVVTIAEKEANFNHPLFMQRFLEALNHYSLIFDSLEATLPPNSRERLAVEQVWFGREIDDVVSREGNKRKQRYERYESWETMLKSLGFSNIPLSPFALSQAKLLLRLHYPSEGYHLQILHDSLFLGWQNRPLFSVSSWH 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3742280 3743533 + Carg21645-RA Car06g00637 150373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00637 393 MobiDBLite consensus disorder prediction 1 22 - -
Car06g00637 393 PANTHER SCARECROW-LIKE PROTEIN 18 7 393 IPR030017 GO:0005634|GO:0010223
Car06g00637 393 MobiDBLite consensus disorder prediction 1 17 - -
Car06g00637 393 ProSiteProfiles GRAS family profile. 18 393 IPR005202 -
Car06g00637 393 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 393 IPR005202 -
Car06g00637 393 Pfam GRAS domain family 27 392 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00637 Car-Chr6:3742280 Car04g02872 Car-Chr4:21709645 3.94E-83 dispersed
Car15g00637 Car-Chr15:3526904 Car06g00637 Car-Chr6:3742280 2.69E-51 transposed
Car16g00966 Car-Chr16:8049089 Car06g00637 Car-Chr6:3742280 3.22E-114 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3688 PF03514 GRAS 3.40E-118 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00637 - - mcha:111020441 626.32