Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00647 ATGGCTGGTCGGATTTTTGAAACTTTGTCATTTGGGTCACAACATGGCCAAAGTAATCAATCTTTGCCATTTTCATCTGGAAATGCATCATTGAAGTTCTTGCTCTTGCATGGTTATTTGGATATTTCTGTCAAGTCAGCCAAGAATCTTCCTAACATGGATATGTTTCATAAGACTCTTGGGGATGTTCTTTCAAAAGTGTCTTTTAAGAGTTCTAAGAACAGTGATGGGCAAAAGGCTCCAAAAGTGACTAGTGATCCTTATGTGACTATCTCTGTATCTGGTGCTGTGATAGGAAGAACTTTTGTGATTGATAATAGTGAGAATCCTGTTTGGATGCAGCATTTTAATGTTCCTGTAGCTCATTATGGTGCTGAAGTGCACTTTGTTGTTAAAGATCATGATGTTGTGGGATCACAAATTATAGGTGTTGTTGCTATTCCTATTGAACAATTATACTCTGGAGATGTAGTTGAGGGTACCTACCCAATCCTTAATAGTAGCAGGAAGCCCTGCAAGCCTGGGGCTGTCTTGAGTTTGTCGATTCGGTATATTCCAGCGGACCGAGCGGCCATTTTTCATGGTGGAATGTATGCATCTTCTGATCATCAGGGAGTTCCAGGCACATATTTTCCTCTTAGGAAGGGAGGTAAAGTTACATTGTACCAAGATGCTCATGTTGAGGATGGATGTCTTCCTTCAGATTTTAAGCTTCATGGTGGGGTTGAATATGAACATAGGAGCTGTTGGGACGACATCACTGAATCGATTAGCCAAGCTCGTCGTTTGATCTATATTACGGGCTGGTCTGTGTACCATAATGTTAGATTGGTTAGGGATGGAAAGGCGAAAGAATGCAGTTTAGGGGACTTACTCAAAGCTAAGTCTCAAGAAGGTGTACGAGTGTTGCTTCTTATATGGGATGATCCAACTTCGACAAGTATGTTGGGATATAAAACGGTTGGGATGATGAATACAAATGATGAGGAGACTCGGCGGTTCTTTAAGAACTCTTCAGTCCAAGTGGTATTGTGCCCACGATCTGGTGGAAAAGGTCATAGCTGGATTAAAAAGCAGGAAGCTGGAACCATCTATACCCACCATCAAAAGACAGTGATTGTAGATGCTGATGCTGGCAATCACAAAAGAAAAATTGTAGCTTTTGTTGGAGGTCTCGATTTATGTTTGGGTCGATATGATACTTCGAGGCATCCTCTTTTTCGGACATTGCAAACTACGCACGTAGATGACTTCCACAACCCCAATTTTACGGGACCAGCTACTGGTTGTCCAAGGGAACCATGGCATGATTTGCACTCTAAGATTGATGGTCCAGCAGCATACGACGTCCTTACGAATTTCGAGGAGCGTTGGTTGAGAGCTTCAGAGCCTCGTGGCCTTAAAAAGCTAAAAAGGTTGAATGAAGATGTGTTGCTCAAAATTGAAAGAATTCCTGAAATTTTGGGAATTGCTGATGCTGCTCGTTTGTGTAACAATGATCCAGAAGGTTGGAACGTGCAGATTTTTCGTTCGATCGACTCGAATTCGGTGAAAGGATTTCCTGAGGACCCGAAAGATGCTATAAGTCGGAACTTGGTATGTGGGAAGAATGTGATGATAGATATGAGTATACATTCAGCATATGTTAATGCAATTCGTGCTGCCCAACGCTTCATTTATATTGAAAATCAATACTTCCTTGGGTCATCTTATAATTGGAGTGCTCACAAAGACTTGGGGGCTAATAACTTAATACCGATTGAAATTGCCCTTAAAATTGTGGAGAAAATCAAAGCTAAAGAAAGGTTTTCAGCATATGTGGTTATCCCAATGTGGCCAGAAGGTGTTCCTACAAGCACTCCGATTCAAAGAATTCTTTTTTGGCAGAGTAGGACAATGCAAATGATGTACGAAATGATATATACAGCTTTAGTGGAGGTTGGACTTCATGAACAGTATAAGCCTGAAGACTACTTGAATTTCTTTTGCCTTGGAAACCGTGAGGTGATCAGTGATAGAGATGGCATTGAAGCCGGAAATGGAGAAAAGAATGCTCAATCACTTGTTCGTAAGAGTCGACGTTTTATGATCTATGTTCATTCTAAAGGGATGATAGTAGATGATGAGTATGTCATATTGGGATCCGCAAATATCAATCAGCGATCCCTTGAAGGTACTAGAGACACTGAAATAGCAATGGGCGCGTACCAATCTCGTCATTCTTGGTCGTCAAGCAGACGCTCGAGTCCACGTGGTCAGGTCTATGGATATAGAATGTCATTATGGGCAGAGCACACTGGGACCATGGAGGAATGTTTCGAGAGACCAGAGAGTATTGAATGTGTAAGACGAATCAGATCATTGGGTGAGAGAAACTGGAGACAATATGTTGCTGAGGAAGTGACAGAAATGAGAAGCCATCTTCTTAAATATCCATTGCAAGTTGAGCCAACGGGTAAGGTCACTCATCTTCCTGGTTCTGAGACCTTCCCAGACCTTGGTGGTAACATATTGGGAACATTCATAGCCATCCAAGAGAACCTTACAATCTGA 2553 41.79 MAGRIFETLSFGSQHGQSNQSLPFSSGNASLKFLLLHGYLDISVKSAKNLPNMDMFHKTLGDVLSKVSFKSSKNSDGQKAPKVTSDPYVTISVSGAVIGRTFVIDNSENPVWMQHFNVPVAHYGAEVHFVVKDHDVVGSQIIGVVAIPIEQLYSGDVVEGTYPILNSSRKPCKPGAVLSLSIRYIPADRAAIFHGGMYASSDHQGVPGTYFPLRKGGKVTLYQDAHVEDGCLPSDFKLHGGVEYEHRSCWDDITESISQARRLIYITGWSVYHNVRLVRDGKAKECSLGDLLKAKSQEGVRVLLLIWDDPTSTSMLGYKTVGMMNTNDEETRRFFKNSSVQVVLCPRSGGKGHSWIKKQEAGTIYTHHQKTVIVDADAGNHKRKIVAFVGGLDLCLGRYDTSRHPLFRTLQTTHVDDFHNPNFTGPATGCPREPWHDLHSKIDGPAAYDVLTNFEERWLRASEPRGLKKLKRLNEDVLLKIERIPEILGIADAARLCNNDPEGWNVQIFRSIDSNSVKGFPEDPKDAISRNLVCGKNVMIDMSIHSAYVNAIRAAQRFIYIENQYFLGSSYNWSAHKDLGANNLIPIEIALKIVEKIKAKERFSAYVVIPMWPEGVPTSTPIQRILFWQSRTMQMMYEMIYTALVEVGLHEQYKPEDYLNFFCLGNREVISDRDGIEAGNGEKNAQSLVRKSRRFMIYVHSKGMIVDDEYVILGSANINQRSLEGTRDTEIAMGAYQSRHSWSSSRRSSPRGQVYGYRMSLWAEHTGTMEECFERPESIECVRRIRSLGERNWRQYVAEEVTEMRSHLLKYPLQVEPTGKVTHLPGSETFPDLGGNILGTFIAIQENLTI 850
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3875202 3881769 - Carg21635-RA Car06g00647 150383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00647 850 Pfam Phospholipase D C terminal 770 840 IPR024632 -
Car06g00647 850 Pfam Phospholipase D Active site motif 364 398 IPR001736 GO:0003824
Car06g00647 850 Pfam Phospholipase D Active site motif 696 722 IPR001736 GO:0003824
Car06g00647 850 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 363 398 IPR001736 GO:0003824
Car06g00647 850 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 695 722 IPR001736 GO:0003824
Car06g00647 850 Pfam C2 domain 38 164 IPR000008 -
Car06g00647 850 ProSiteProfiles C2 domain profile. 14 162 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00647 Car-Chr6:3875202 Car08g00824 Car-Chr8:5496173 0 dispersed
Car06g00647 Car-Chr6:3875202 Car17g00003 Car-Chr17:17533 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00647 K01115 - csv:101208016 1586.24