Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00649 ATGGCTTCCTACTTCCCTCGTCCGAGCTTTGTCGCCATCGTCGTCGTTTTCGTTTTGCCGCTTATGATGCCCGGGATCACAACTAGACCGGTGCTCGCCATCTTTCGACCGAGCCCTTGGAAGATTGCTCATGCCACCTTTTATGGCGACGAGACAGCATCTGAAACAATGGGAGGAGCTTGTGGATATGGAAACCTCTTCACGAACGGCTATGGCATCGACACGGTGGCTTTAAGCTCAACGCTTTTCAACAATGGCTACGCTTGTGGAACTTGCTTTCAAATCAAATGCATGCAATCCAAAGCTTGTTACGCTAACGTTGCGTTCACAACGGTGACGGCCACCAATCTCTGTCCCCCCAATTGGTCTAAACCCTCTGACAACGGTGGCTGGTGCAACCCTCCGAGGGTTCATTTTGACATGTCGAAACCTGCCTTTATGAAGATCGCCAACTGGAAGGCTGGGATCATCCCCGTTGCGTACCGTCGCGTTCCATGCATAAAAAAAGATGGCATTCGGTTCACATTCCAAGGAAATGGGTACTGGCTTTTGGCGTACGTGATGAATGTCGGGGGCGGAGGGGACGTGTCCGGGATGTGGGTGAAAGGAAGCAAGACAGGGTGGATTAGAATGAGCCATAATTGGGGAGCTTCCTATCAAGCATTTTCCACGTTGGTTGGACAATCCCTGTCTTTTATAGTCACCTCGTACACCACCAAAGAGACCATCACGGCTTGGAATGTTGCTCCTTCTAATTGGAAGTTTGGCGCGACCTACAAAGCTAACGTCAACTTCCGTTGA 801 50.56 MASYFPRPSFVAIVVVFVLPLMMPGITTRPVLAIFRPSPWKIAHATFYGDETASETMGGACGYGNLFTNGYGIDTVALSSTLFNNGYACGTCFQIKCMQSKACYANVAFTTVTATNLCPPNWSKPSDNGGWCNPPRVHFDMSKPAFMKIANWKAGIIPVAYRRVPCIKKDGIRFTFQGNGYWLLAYVMNVGGGGDVSGMWVKGSKTGWIRMSHNWGASYQAFSTLVGQSLSFIVTSYTTKETITAWNVAPSNWKFGATYKANVNFR 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3892111 3892995 + Carg21633-RA Car06g00649 150385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00649 266 Pfam Lytic transglycolase 75 161 IPR009009 -
Car06g00649 266 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 58 171 IPR007112 -
Car06g00649 266 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 181 261 IPR007117 -
Car06g00649 266 Pfam Expansin C-terminal domain 172 250 IPR007117 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00649 Car15g01071 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00649 Car-Chr6:3892111 Car07g00978 Car-Chr7:5558020 3.64E-95 dispersed
Car15g01071 Car-Chr15:8423647 Car06g00649 Car-Chr6:3892111 6.52E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00649 - - csv:101207770 497.664