Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00668 ATGGGGTTTTGTTTTGATTGCAGAAAATTCTGTATGGAGGTACGAGAAGGGGAGGGTGGAAATGGGGTTACGGCGGCGGCTGAGTCAGATCCTTCGAGACCCGACACGACGGCTCCGGTACCGGAAGGTGGTGGTCCTGTAGGTTCTGCGGCTGTGGCGGCGAAGAAGAAGAGGGGGAGGCCGAGGAAGTATGGGCCGGATGGAAAGTTGAATGTGGCGGCGCTGTCACGGAAGGCAATATCAGGGTCGGCACTAGCACTGGCAGTGGCACCGGCGGCGGTGATTGATTTCTCGGCTGCGAAACGGGGGAAAGTGCGGCCGGCGAGTTGGTTGAGCAAAACCAAATATGAAGCGGAGAGTTTAGCGGAATGGGTACCTTGCTCCGTTGGTGGTAATTTTACACCTCATATCATCGCTGTCAACTCGGGTGAGGACATAACGATGAAGATTCTCTCATTTTCTCAACAAGGGCCTCGAGCCATATGCATTCTGTCTGCTAATGGTGTGATTTCGAGCGTCACTCTTCGTCAACCGAATTCTTCTGGAGGAACATTAACATATGAGGGTCGGTTCGAGATATTGTCGTTGTCAGGATCGTTCATCCCGAGTGACAATGCAGGAGCTAGGAGTCGAACTGGTGGAATGAGTGTTTCCTTAGCGAGTTCAGACGGACGTGTCTTTGGTGGTGGAGTTGTTGGTTTGTTAGTAGCTGCAAGTTCTATTCAAGTGGTAGTAGGAAGCTTTATATCAGGGAACCAACATGAACAAAAATCGAAGAAACCGAAACAAGACATTGTATTACCGGTTTCAGCTCTTCCAATATCCCCTGTTGAATTGAAGTCATACATGACGACAACGACAACGACAACGACAACGACAACAACGCCATCATTCCGTGCTGAGACTTGGTCACCTTTAGGGCTAGATTTGAGAAGTCAGCCAACCGATACGAACGTAAGTTAA 963 49.95 MGFCFDCRKFCMEVREGEGGNGVTAAAESDPSRPDTTAPVPEGGGPVGSAAVAAKKKRGRPRKYGPDGKLNVAALSRKAISGSALALAVAPAAVIDFSAAKRGKVRPASWLSKTKYEAESLAEWVPCSVGGNFTPHIIAVNSGEDITMKILSFSQQGPRAICILSANGVISSVTLRQPNSSGGTLTYEGRFEILSLSGSFIPSDNAGARSRTGGMSVSLASSDGRVFGGGVVGLLVAASSIQVVVGSFISGNQHEQKSKKPKQDIVLPVSALPISPVELKSYMTTTTTTTTTTTTPSFRAETWSPLGLDLRSQPTDTNVS 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3979908 3981790 + Carg21614-RA Car06g00668 150404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00668 320 ProSiteProfiles PPC domain profile profile. 130 271 IPR005175 -
Car06g00668 320 MobiDBLite consensus disorder prediction 18 64 - -
Car06g00668 320 Pfam Plants and Prokaryotes Conserved (PCC) domain 135 248 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00668 Car-Chr6:3979908 Car06g00971 Car-Chr6:7448183 3.30E-76 dispersed
Car15g01061 Car-Chr15:8352036 Car06g00668 Car-Chr6:3979908 4.53E-112 wgd
Car16g00986 Car-Chr16:8368895 Car06g00668 Car-Chr6:3979908 8.69E-152 wgd
Car02g01272 Car-Chr2:8526097 Car06g00668 Car-Chr6:3979908 6.73E-112 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00668 - - cmos:111448214 538.88