Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00715 ATGCCTAGTGTAATGAAAGATTCATCAGAGAAGGACTCGGAGGCGTTTGTAGAAGTGAATCCAACCGGTCGATATGGGCGATACAGCGAGCTTCTCGGCTCGGGTGCGGTGAAGAAAGTATATAGAGGATTTGATCAAGAAGAAGGAATTGAGGTAGCTTGGAACCAAGTGAAACTAAGAAGCTTTTCAAATGATCCATCAATGATTGATAGGTTATACTCAGAAGTGACATTGTTAAGAACCTTAAAGAACAACAACATAATTGCCTTGTACGATGTATGGCTCGACAAAGCTCATGGAACACTAAATTTCATTACCGAGGTTTGTACAAGTGGGAACCTTAGAGAGTATAGGAAGAAGCACAGGCAAGTGTCTTTGAAGGCTTTGAAGAAATGGTCCAAGCAAATTCTCAAGGGTTTGCACTATTTGCATACTCGTGAGCCTTGTGTTATCCATAGGGACTTGAATTGTAGCAACCTCTTTGTCAATGGCAATGTCGGGCAGGTGAAAATTGGCGACTTGGGCTTGGCTGCAACGGTGAGAAAGAATCACTCAGCTCATTCAGTGCTTGGGACGCCAGAGTTCATGGCACCTGAGCTATATGAAGAGCATTACACTGAGCTTGTGGATATATATTCATTTGGGATGTGTTTGCTTGAATTGGTCACTTTGGAAATCCCTTATAGTGAATGTGACAATGTTGCCAAAATCTACAAGAAAGTGTCCTCCGGTATTAAGCCACTGGCCCTTGCCAAGGTCAAGAACCTTGAGGTCAAGGCTTTCATAGATAAGTGTCTTGCTCAATCTCAAGCTCGGCCCTCCGCTGCCGACCTCCTCCTCGACCCCTTCTTCAGAGAAATTAACGACGAACACGATGATGATTAG 885 43.95 MPSVMKDSSEKDSEAFVEVNPTGRYGRYSELLGSGAVKKVYRGFDQEEGIEVAWNQVKLRSFSNDPSMIDRLYSEVTLLRTLKNNNIIALYDVWLDKAHGTLNFITEVCTSGNLREYRKKHRQVSLKALKKWSKQILKGLHYLHTREPCVIHRDLNCSNLFVNGNVGQVKIGDLGLAATVRKNHSAHSVLGTPEFMAPELYEEHYTELVDIYSFGMCLLELVTLEIPYSECDNVAKIYKKVSSGIKPLALAKVKNLEVKAFIDKCLAQSQARPSAADLLLDPFFREINDEHDDD 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4444370 4445254 - Carg25364-RA Car06g00715 150451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00715 294 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00715 294 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00715 Car-Chr6:4444370 Car20g00574 Car-Chr20:3222624 1.64E-165 dispersed
Car06g00715 Car-Chr6:4444370 Car16g00906 Car-Chr16:7419118 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88939 PF00069 Pkinase 7.20E-50 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00715 K08867 - csv:101221172 535.028