Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00732 ATGAGGAGAGGGACAGCGGCGGTGCGCGTGGCACCAATAACCGGGTCGGAGCGGAGATACAGAGGAGTTCGCCGAAGGCCATGGGGGAGATTCGCGGCGGAGATCAGAGACCCATTGAAGAAGACCAGAGTTTGGTTGGGCACCTTCGATTCCGCCGAGGATGCCGCCCGTGCTTACGACAACGCTGCCATAACCCTCCGCGGCCCCAAAGCTAAAACCAATTTCCCCCTTCCCACTCCCACCTCCTTTTTCGATTACCCTCCTCCTTGCCCCGATCGCCGATTCCTTACTAACCCTCACAGACCCACTTCCAGCACCCTCAGCTCCACTGTTGAGTCCTTCAGTGGTCCCCGAACACCCTCTGCGGCGGCTGCCACTTCCGCCTCTCGTCGATACCCACGCACGCCGCCCGTCGTCCCTGAGGATTGCCATAGCGACTGCGATTCGTCGTCCTCGGTCATCGACGACGGCGACATCGCTTCCTCGTCCATGATTCGTCGGAAATCTCCCCTGCCGTTCGATCTTAACATTCAACCGTCTGATCATCTAGATTTTGGCGGCGATGATCTTGGACGCACCGCTTTGTGCCTCTGA 594 59.09 MRRGTAAVRVAPITGSERRYRGVRRRPWGRFAAEIRDPLKKTRVWLGTFDSAEDAARAYDNAAITLRGPKAKTNFPLPTPTSFFDYPPPCPDRRFLTNPHRPTSSTLSSTVESFSGPRTPSAAAATSASRRYPRTPPVVPEDCHSDCDSSSSVIDDGDIASSSMIRRKSPLPFDLNIQPSDHLDFGGDDLGRTALCL 197
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4705517 4706110 - Carg25346-RA Car06g00732 150468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00732 197 MobiDBLite consensus disorder prediction 98 128 - -
Car06g00732 197 ProSiteProfiles AP2/ERF domain profile. 19 76 IPR001471 GO:0003700|GO:0006355
Car06g00732 197 MobiDBLite consensus disorder prediction 97 152 - -
Car06g00732 197 Pfam AP2 domain 19 68 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00048 Car-Chr2:344071 Car06g00732 Car-Chr6:4705517 5.51E-46 dispersed
Car06g00732 Car-Chr6:4705517 Car20g00207 Car-Chr20:1191194 3.24E-48 dispersed
Car16g00883 Car-Chr16:6806077 Car06g00732 Car-Chr6:4705517 6.21E-77 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3696 PF00847 AP2 1.60E-14 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00732 K09286 - csv:101219993 235.728