Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00742 ATGGCACTGGTCTTGCACGCAGGAAAGACGAATAAAAATGGTTTCAAGGCTCTCATTGTTGCACAGTACAATGGAGTCGAAGTGAAATTGGTCCCGGACTTTGAGATGGGCGTTTCAAACAAAACTCCGGAGTTTGTCAAGATGAACCCTCTTGGGAAGGTGCCTGTTTTGGAAACGCCCGATGGCCCCATATTTGAGAGTAATGCGATAGCTCGCTATGTTGCACGCTTGAAGGCTGATACTACTCTGTGTGGTTCATCTGTTATTGAGTATGGGCATATTGAACAATGGATTGATTTTGCATCATTGGAGATAGATTCAAATATGGTGACTTGGTATAGGCCTAGAATGGGGAGAGCTCCTTATCTTCCTCCTGTCGAGGAAGCTGCAATTGCTGCATTGAAGAGGGCTTTGGGAGCTTTGAATACATACCTTGCTTCAAACACTTACCTAGTTGGTCATTCTGTAACATTGGCTGATATCATCATGACTTGTAACCTGTTTATGGGTTTTGCTAAGCTCATGACTAAGAGCTTTACCTCAGACTTCCCACACGTTGAGAGATACTTCTGGACCTTGGTCAATCAACCAAACATCAAAAGAATTTTGGGTGAGGTCAAGCAGGCAGAGTCAGTTCTACCTATTCAATCTACTAAGCAAACCCCCAAAGATGAGGTAAAGAAAGAACCCAAAAAGGAAGCTGCTAAAGAGAAGCCCAAGGCTGTCGTTGGCGAGGGAGACGATGAAACACCAAAGCCAAAACCCAAGAATCCTCTTGATTTGCTTCCTCCCAGTAAGATGATTCTGGATGAGTGGAAGCGGTTATACTCAAATACCAAAACCAACTTCCGGGAGATCGCAATTAAAGGATTTTGGGAGATGTATGATCCAGAGGGGTATTCTCTTTGGTTCTGTGATTATAAGTACAACGACGAGAATACTGTTTCGTTCGTAACGTTGAACAAGGTTGGCGGATTTCTCCAGCGAATGGATCTTGCTCGGAAGTATGCTTTTGGGAAGATGTTAGTGATTGGATCGGAGGCTCCATTTAAAGTGAAGGGGCTGTGGCTTTTCCGTGGACAAGAGATCCCACAATTTGTGGTGGATGAGTGCTACGACATGGAGCTTTATGAATGGAGAAAGGTTGAGATATCAGATGAGGCGCAGAAGGAACGAGTCAACCAGATGATTGAAGATAAGGAGCCTTTTGAAGGAGAGGCTTTGTTGGATGCCAAATGCTTC 1242 44.36 MALVLHAGKTNKNGFKALIVAQYNGVEVKLVPDFEMGVSNKTPEFVKMNPLGKVPVLETPDGPIFESNAIARYVARLKADTTLCGSSVIEYGHIEQWIDFASLEIDSNMVTWYRPRMGRAPYLPPVEEAAIAALKRALGALNTYLASNTYLVGHSVTLADIIMTCNLFMGFAKLMTKSFTSDFPHVERYFWTLVNQPNIKRILGEVKQAESVLPIQSTKQTPKDEVKKEPKKEAAKEKPKAVVGEGDDETPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREIAIKGFWEMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEAPFKVKGLWLFRGQEIPQFVVDECYDMELYEWRKVEISDEAQKERVNQMIEDKEPFEGEALLDAKCF 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5037073 5039855 - Carg26076-RA Car06g00742 150478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00742 414 Pfam Glutathione S-transferase, N-terminal domain 10 76 IPR004045 -
Car06g00742 414 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Car06g00742 414 MobiDBLite consensus disorder prediction 214 260 - -
Car06g00742 414 Pfam Glutathione S-transferase, C-terminal domain 128 197 IPR004046 -
Car06g00742 414 MobiDBLite consensus disorder prediction 221 255 - -
Car06g00742 414 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 255 414 IPR001662 GO:0003746|GO:0006414
Car06g00742 414 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 215 IPR010987 -
Car06g00742 414 Pfam Elongation factor 1 gamma, conserved domain 254 362 IPR001662 GO:0003746|GO:0006414
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01944 Car-Chr4:12571068 Car06g00742 Car-Chr6:5037073 0 dispersed
Car06g00742 Car-Chr6:5037073 Car16g00797 Car-Chr16:5228476 0 dispersed
Car06g00742 Car-Chr6:5037073 Car04g00833 Car-Chr4:4864965 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00742 K03233 - rcu:8263260 685.256