Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00743 ATGGGCTGCATTTGCTCTAAAGGAATTCCATCTGACGACTATGTTGCTGAGAATCATTCCAAAGAAAGACATTTGAAGTCTAATAGATCTTCCAGGCATCTAGGGGCTTCATTGAGGAAAGAAGAGCCGGTGTTGCATGCTGATGGAGGGCAAAGTGATGCAATGGCGCGATTGATAACAAACCATCATGGTGAAGAAGATGCTGGATCAACATCTGAATCGGATGATGTTGAGAAGGCAACACCCATTGAGAAAGCTGCCACTGTCAAGCCACTGCGGCAAGAACGACCAACTATGGAAGATGGAGGAAAGAGAGTAGGAGTACATAATAGTAATGCAACACCTAGAATAACCAATGTTGTTAATGGGGAAAAGGGGGCTTTGGTTATTGCTGGATGGCCTTCTTGGCTGGCATCTGTGGCTGGAGAAGCAATCAATGGATGGGTTCCTAGAAAGGCAGACTCTTTTCAGAAGTTGGATAAGATTGGACAAGGAACATACAGCAGCGTGTACAGGGCCCGCGATATTGAAACAAACAAAGTTGTTGCGTTGAAGAAGGTGCGATTTGCTAATATGGATCCTGAAAGTGTTCGTTTCATGGCCAGGGAAATCCTCATCCTGCGAAGGCTTGACCACCCCAATGTTATGAAGCTTGAAGGTCTTATTACTTCAAGGGTTTCTGGCAGTCTATACTTAATATTTGAGTACATGGAACATGATCTTGCAGGGTTGGCAGCTACCCCAGGGATCAAGTTCACTGAATCGCAGATAAAATGCTATATGCAACAGCTGCTTTGTGGCCTTAAACATTGCCATTCCCAGGGAATTTTGCACCGTGACATCAAGGGATCGAATCTTCTGATTGATAATAATGGTACTCTAAAGATAGGTGATTTTGGTCTATCAACCTTTTTCCGTTCCCGACAAAAGCAGCCCCTTACAAGTCGCGTGGTAACGTTGTGGTATCGACCGCCTGAGCTTTTGCTTGGTGCAACGGACTATGGAGTTTCTGTAGATTTGTGGAGTACTGGTTGCATTCTTGCAGAACTGTATGCTGGGAAGCCTATCATGCCTGGAAGAACAGAGGTGGAGCAACTACATAAGATCTTCAAACTTTGTGGCTCCCCTTCTGAAGAGTACTGGAAAAAATCAAAATTACCTCATGCCACCATCTTTAAACCTCAACATCCTTACAAGCGATGTTTTGCTGAGACATTCAAAGACTTCCCTTCCTCTGCATTGGCCCTTTTAGATGTACTTCTTGCGGTTGAACCCGATGGTCGTGGAACAGCTTCCTCTGCCCTTCAAAGCGAGTTCTTTACTACAAAACCGCTTCCATCGGAGCCCTCTACTTTACCAAAGTACCCACCAAGCAAGGAGTTTGATGTTAAGCTTCGTGATGAGGAAAACCGAAGAAGAAGAGCTCCTATCAGTACAGCACGTGAACATGAAGCAGCCCGAAAGTTTCCGAAAGAACCTAAAGCTATTCCTGCACCAGATGCAAATGCTGAATTGCAGACATCCATACAGAAGAAACTAAGGCAGCAGAATCCTTCAAGTGTCAGTGAAAAGTATAATCCTGAAGAGGACGGAGGTTCTGGCTTTTGCATTGATCCCCCTAAAGAATCAACACAAACTCAACCTAATGCTTCGAGTTCTTCACGAAACATGAACAGGAGTCGGGTCGATACTCCAGGAGGTTTTTCAGTTGGGGAAAAGGGCGCAGAACTTAGAAAACAAAGATCTTATATGCACCATGGTTCTGGACAGTTATCCCGGTATTCCAATTCCGTTGCAGGTCAAGGCAGTTTGCAATTCGGCTGTGGTGGAGAAAGTAGTAGTAATTCACGTTGGCCAGAAGAGTGTTTTAATGTGTCATATAACCATATCAATGGTGGCGAATCTTCAGAAAAGCATGAATGGTCTCACCATTTACTAGAAAGTCCGAAGTCTTCTTATAAGATAGATGATCAGTCATCTGGAAAAGAGTCTGCTATGAATTACGCCCCGAAAAAGAGAATTCATTATTCAGGACCCTTGATGCCTCCTGGTGGAAACCTTGAGGAAATGTTAAAAGAGCACGAGAAACAAATCCAGCATGCAGTACGTAAGGCTCGTATAGACAAAGCGAAGACAAGAAAGACATACGATGACAAAAGTCTATCGGAGTCGTTGCTTCACCATGTGAGAAACGGCAATTGA 2202 44.23 MGCICSKGIPSDDYVAENHSKERHLKSNRSSRHLGASLRKEEPVLHADGGQSDAMARLITNHHGEEDAGSTSESDDVEKATPIEKAATVKPLRQERPTMEDGGKRVGVHNSNATPRITNVVNGEKGALVIAGWPSWLASVAGEAINGWVPRKADSFQKLDKIGQGTYSSVYRARDIETNKVVALKKVRFANMDPESVRFMAREILILRRLDHPNVMKLEGLITSRVSGSLYLIFEYMEHDLAGLAATPGIKFTESQIKCYMQQLLCGLKHCHSQGILHRDIKGSNLLIDNNGTLKIGDFGLSTFFRSRQKQPLTSRVVTLWYRPPELLLGATDYGVSVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRCFAETFKDFPSSALALLDVLLAVEPDGRGTASSALQSEFFTTKPLPSEPSTLPKYPPSKEFDVKLRDEENRRRRAPISTAREHEAARKFPKEPKAIPAPDANAELQTSIQKKLRQQNPSSVSEKYNPEEDGGSGFCIDPPKESTQTQPNASSSSRNMNRSRVDTPGGFSVGEKGAELRKQRSYMHHGSGQLSRYSNSVAGQGSLQFGCGGESSSNSRWPEECFNVSYNHINGGESSEKHEWSHHLLESPKSSYKIDDQSSGKESAMNYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTRKTYDDKSLSESLLHHVRNGN 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5090310 5099755 - Carg26077-RA Car06g00743 150479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00743 733 Pfam Protein kinase domain 156 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g00743 733 ProSitePatterns Protein kinases ATP-binding region signature. 162 185 IPR017441 GO:0005524
Car06g00743 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Car06g00743 733 MobiDBLite consensus disorder prediction 634 651 - -
Car06g00743 733 Coils Coil 684 704 - -
Car06g00743 733 MobiDBLite consensus disorder prediction 539 563 - -
Car06g00743 733 MobiDBLite consensus disorder prediction 703 733 - -
Car06g00743 733 MobiDBLite consensus disorder prediction 703 725 - -
Car06g00743 733 MobiDBLite consensus disorder prediction 440 572 - -
Car06g00743 733 MobiDBLite consensus disorder prediction 634 664 - -
Car06g00743 733 MobiDBLite consensus disorder prediction 459 494 - -
Car06g00743 733 MobiDBLite consensus disorder prediction 12 49 - -
Car06g00743 733 MobiDBLite consensus disorder prediction 503 526 - -
Car06g00743 733 ProSiteProfiles Protein kinase domain profile. 156 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01945 Car-Chr4:12574842 Car06g00743 Car-Chr6:5090310 0 dispersed
Car06g00743 Car-Chr6:5090310 Car16g00361 Car-Chr16:2244419 0 dispersed
Car06g00743 Car-Chr6:5090310 Car04g00518 Car-Chr4:2917917 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88940 PF00069 Pkinase 3.50E-68 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00743 - - csv:101214435 1264.6