Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00754 ATGGGTTTCTTAGTTTCTCTCTTCAAACAGAAGGGTTTTGTTATTTTCTTGAATCTCTCGATTCTCTCACTGGCCTGTGCTTTTTTAGCGATTCGATTTCACTATCCAGAAGAAACCCAATTCCGTGTTCTTAACAAGAGCTTCAGAAAACTCCATGGCACTGCTCAGGAAGATTGCCGGAATTTTATTGGTCTACCTGACTTTGAAGCCAAGTGCTCTGTTCTTAAATCCAACAACCCTTGTAACACCCAAGGCTATATAGATTATCTTTATGTTTTCTATTGTCAGTATGGAAGTTTTAGCATTCTGGGCTATACTCTGTTGTTTCTGTGGCTTCTTGTGTTGTTCTATCTTTTGGGTAACACTGCTTCTGAATACTTTTGCTCTTCCCTTGAGAGTTTGTCGAAATTGTTGAATCTATCCCCAACAATTGCTGGTGTTACTCTGCTTTCTTTGGGTAATGGCGCACCTGATGTTTTTTCCAGCCTTGTTGCTTTCATGGGAGATGGAACTACTGATATTGGCTTGAATACTGTTCTTGGTGGAGCCTCGTTTGTTACCTGCGTCGTTGTCGGAATCATAAGCATTTTGCTGCGTTTTCGACGGATTAAGGTTAATAGGGTTGCCTTCATTAGAGATGTTTTGTTCTTCCTCTTGGTTCTTTTGTCTGTTTTTTTGATATTGCTCCATGGACATATCAATCTGTGGGGTTCCCTTGCCTTTTCTTCCATGTATCTTGTTTACGTTTTGGTTGTTTATGTCTCCCATGCCCAATGGCTTAGTTTGAGAAGGGATATTTTCCAACCCCTTTTGAAAGAGCCACCAAAGGATGAGTCTGAGGGCAAAAATGACGATGACGACAACGACGACGGTGTTAGAATCGACGTATACAATGTCTGTTTTTGTCCTAGTTTTTCGCCTTCTTGTGTTTTTTTCCTTCGCCTTCTTGAGATTCCTCTTTACTTGCCTAGAAGGCTGACAATTCCCACTATTGCTGAAGAAAACTGGTGTAGACTGTACGCAGTTGCTTCAGTGACATTAGCTCCCATTCTCTTAGCTTTTCTATGGGCATTTCACCACCAGATCGATATGTCTCGGTCGAACGTTATCATCTGCATCGTCGCCTTGCTGGTCGGAGTTAGTTTTGGAATTGTTGCATTTGTGACAACTGAGAATTCAAGCCCACCAAAGAAGTGGCTGTTCCCATGGCTTGCAGCTGGGTTCACCATGAGTTTAACATGGAGTTATATTATAGCTCAGGAACTGGTAGGGCTATTGGTTTCACTTGGCTACATAATGGGCATAAGCCCTTCAATTCTAGGACTGACCTTCCTGGCTTGGGGAAACTCTCTTGGGGATTTAGTTTCCAATGTGACCATGGCCATGAACGGCGGGCAGCGAGGCGCCCAAATAGCCATCTCCGGCTGCTACGCCGGCCCCATCTTCAGCACGCTGTTCGGCCTTGGGATGTCCCTTGTCAGCGCTTCATGGAAGAAGTATCCTGAGCCGGTGGCCATCCCGGCTGACCCTTACGTGATGGAGACATTGGGGCTGTTGGTAGGAGGGCTGCTATGGGCGCTTGTAAGTTTGCCAAGGAGAGAGATGAGGGTTGATGCAGTGTTGGGAGGAGGCCTTCTGGCTATCTATTTGACCTCTTTGCTCTTAAGAGTGTTGCAAGCTCTTGGGTCTTCCCATTAG 1698 44.99 MGFLVSLFKQKGFVIFLNLSILSLACAFLAIRFHYPEETQFRVLNKSFRKLHGTAQEDCRNFIGLPDFEAKCSVLKSNNPCNTQGYIDYLYVFYCQYGSFSILGYTLLFLWLLVLFYLLGNTASEYFCSSLESLSKLLNLSPTIAGVTLLSLGNGAPDVFSSLVAFMGDGTTDIGLNTVLGGASFVTCVVVGIISILLRFRRIKVNRVAFIRDVLFFLLVLLSVFLILLHGHINLWGSLAFSSMYLVYVLVVYVSHAQWLSLRRDIFQPLLKEPPKDESEGKNDDDDNDDGVRIDVYNVCFCPSFSPSCVFFLRLLEIPLYLPRRLTIPTIAEENWCRLYAVASVTLAPILLAFLWAFHHQIDMSRSNVIICIVALLVGVSFGIVAFVTTENSSPPKKWLFPWLAAGFTMSLTWSYIIAQELVGLLVSLGYIMGISPSILGLTFLAWGNSLGDLVSNVTMAMNGGQRGAQIAISGCYAGPIFSTLFGLGMSLVSASWKKYPEPVAIPADPYVMETLGLLVGGLLWALVSLPRREMRVDAVLGGGLLAIYLTSLLLRVLQALGSSH 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5216029 5217726 - Carg26088-RA Car06g00754 150490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00754 565 Pfam Sodium/calcium exchanger protein 404 555 IPR004837 GO:0016021|GO:0055085
Car06g00754 565 Pfam Sodium/calcium exchanger protein 109 253 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00754 Car-Chr6:5216029 Car10g00695 Car-Chr10:3599728 1.75E-136 dispersed
Car14g00488 Car-Chr14:2620009 Car06g00754 Car-Chr6:5216029 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00754 K13754 - csv:101204766 883.248