Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00758 ATGACTTCCGCCACTCACCATCTCCTCTCCGCCCCCCATTTCAAGGATCTCGCCATTAAACTCTTCGGCCGCACCATCCCTTTGCCGGAATCCAACGTTTCCGCCGCCCTGCAAAATCTGGATGGTTGCAACCATTTGAAAGAAGGTGAGCAGTGTGTGTCGGGTGCACAAGAGTCGAGGTCCAGCGTTTTAGTAGGCGATGATGAAGAAAAGCAGGAAGAATTGGAGGTGGATTTGAAAGAGGAGCAGGGAGATGGTAATGAAGAGAGAGTTTTGAAGAAGCCAGACAAGATCATTCCTTGTCCTAGATGTAACAGTTTAGAAACTAAGTTCTGTTACTTCAACAACTACAATGTCAATCAACCTAGGCATTTCTGCAAGAACTGCCAAAGATATTGGACTGCTGGTGGCACCATGAGAAACGTTCCTATCGGTGCAGGACGACGAAGGAACAAGCAATTGCCATCTCAATACCGACACATAATAGTATCATCCTCCGAGGGACTTGCGACATCTCGGTTCGAACCATCGGATTCGACGAATCACCGTCAATTCATATCAGGCCTTGAGTCTCCTGCTTTCAGGCCTTCCAATGCCAATGCCACTCTTCTGAAGTTTGGACCTGAAGCACCACTTTGTGAATCCATGGAGACCGTGCTCAGTCTTGGAGACCAGAAGAGGTCCATTGAGATTGGCTCTGCATATAGCAGAGACAGTCCTGATGAACCATCCTCCTGTGGATCCTCCTCCATGACAACAAATGAATTCCCTAAAACTGTCGTCGGGAGGGAAGCACCCAGATTGTCGGGTTCGAGTAATGAGAACACTTCACCGAACACGATTCGTTGTTACCCCGTTCCACAATTGGTTTTTCCATTGAATCAGGGTGGGAACGGTATAGTTTCATCAGCAATGGCTAAAGGTTCAGATAGCACGAGTATATCCAATCCAGTTCAATGGCTTCCTGCGACAATGCTGGCAGTTCCAGGCTACTGCACGCCTAGCCTTCCGTTACAATTTGTGCCAGCATCATATTGGGGCTGCACGCCCGTATGGACCGCAGCTGGTGTCCGTGCATCTCAAACATCTGGTAGCTGCGCCACGAGTTTATCACCGACACTCGGAAAGCATTCGAGAGATGCAAGTAGCTTGACAGAGGAAGAGGAATCAGAGAAATGCGAGGTGGTACCAAAGACAGTACGGGTTGATAAGGTGAGCGAAGGGTGA 1227 48.9 MTSATHHLLSAPHFKDLAIKLFGRTIPLPESNVSAALQNLDGCNHLKEGEQCVSGAQESRSSVLVGDDEEKQEELEVDLKEEQGDGNEERVLKKPDKIIPCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPIGAGRRRNKQLPSQYRHIIVSSSEGLATSRFEPSDSTNHRQFISGLESPAFRPSNANATLLKFGPEAPLCESMETVLSLGDQKRSIEIGSAYSRDSPDEPSSCGSSSMTTNEFPKTVVGREAPRLSGSSNENTSPNTIRCYPVPQLVFPLNQGGNGIVSSAMAKGSDSTSISNPVQWLPATMLAVPGYCTPSLPLQFVPASYWGCTPVWTAAGVRASQTSGSCATSLSPTLGKHSRDASSLTEEEESEKCEVVPKTVRVDKVSEG 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5382101 5383585 + Carg25470-RA Car06g00758 150494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00758 408 ProSitePatterns Zinc finger Dof-type signature. 101 137 IPR003851 GO:0003677|GO:0006355
Car06g00758 408 MobiDBLite consensus disorder prediction 380 396 - -
Car06g00758 408 MobiDBLite consensus disorder prediction 365 379 - -
Car06g00758 408 Pfam Dof domain, zinc finger 97 153 IPR003851 GO:0003677|GO:0006355
Car06g00758 408 ProSiteProfiles Zinc finger Dof-type profile. 99 153 IPR003851 GO:0003677|GO:0006355
Car06g00758 408 MobiDBLite consensus disorder prediction 266 280 - -
Car06g00758 408 MobiDBLite consensus disorder prediction 238 257 - -
Car06g00758 408 MobiDBLite consensus disorder prediction 365 396 - -
Car06g00758 408 MobiDBLite consensus disorder prediction 232 280 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00758 Car-Chr6:5382101 Car10g00186 Car-Chr10:895188 6.74E-57 dispersed
Car14g00485 Car-Chr14:2606480 Car06g00758 Car-Chr6:5382101 3.19E-175 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3701 PF02701 zf-Dof 2.80E-31 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00758 - - cmax:111471912 759.985